Strain Fitness in Shewanella loihica PV-4 around Shew_2133

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,478,301	-		Shew_2132	0.28	+0.0
2,478,399	+		Shew_2132	0.38	+0.3
2,478,594	+		Shew_2132	0.59	+0.5
2,480,523	+		Shew_2134	0.72	-0.3
2,480,531	-		Shew_2134	0.74	-0.0
2,480,594	-		Shew_2134	0.88	+0.7
2,480,655	-				+0.4
2,480,760	-				-0.2
2,480,809	-				+0.3
2,480,907	-				-0.2
2,480,951	-				+0.2
2,480,974	+				-0.1
2,480,974	+				+0.3
2,481,076	-				-0.0