Strain Fitness in Shewanella loihica PV-4 around Shew_1587

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,816,390	+		Shew_1586	0.13	-1.3
1,816,642	+		Shew_1586	0.80	-1.0
1,816,649	+		Shew_1586	0.82	-0.8
1,817,162	+		Shew_1587	0.11	-0.3
1,817,580	-		Shew_1587	0.62	-0.6
1,817,600	+		Shew_1587	0.64	-2.1
1,817,612	+		Shew_1587	0.66	+0.0
1,817,926	+				-0.6
1,817,934	-				-0.6
1,818,176	-		Shew_1588	0.55	+0.1
1,818,253	-		Shew_1588	0.72	+0.4
1,818,334	-		Shew_1588	0.89	-0.0
1,818,334	-		Shew_1588	0.89	+0.4
1,818,559	-				+0.1