Strain Fitness in Shewanella loihica PV-4 around Shew_1150

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,323,622	+				+0.1
1,323,901	+		Shew_1149	0.40	+0.2
1,323,909	-		Shew_1149	0.41	-1.0
1,324,564	+		Shew_1150	0.13	-1.0
1,324,570	-		Shew_1150	0.14	-0.5
1,324,572	-		Shew_1150	0.15	-0.3
1,324,648	-		Shew_1150	0.33	-1.1
1,324,768	+		Shew_1150	0.61	+0.3
1,324,925	+				+0.6
1,325,090	+				-0.8
1,325,105	+				-2.3
1,325,229	+		Shew_1151	0.11	-0.5
1,325,318	+		Shew_1151	0.24	+0.7
1,325,463	+		Shew_1151	0.45	-1.7
1,325,495	+		Shew_1151	0.49	+0.2
1,325,571	-		Shew_1151	0.60	-3.0