Strain Fitness in Shewanella loihica PV-4 around Shew_1114

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,285,072	+		Shew_1113	0.54	-0.5
1,285,257	+		Shew_1113	0.66	+0.1
1,285,338	+		Shew_1113	0.71	-0.4
1,285,359	+		Shew_1113	0.72	+0.2
1,285,471	-		Shew_1113	0.80	-0.6
1,285,567	+		Shew_1113	0.86	+0.4
1,286,247	+		Shew_1114	0.52	-0.3
1,286,604	-				-0.3
1,287,007	-				+0.4
1,287,168	-				-0.6
1,287,274	+				-0.0
1,287,395	+				-1.0
1,287,397	+				+0.7
1,287,397	+				+0.5
1,287,402	+				+0.0
1,287,405	-				+0.3
1,287,410	-				+0.0