Strain Fitness in Shewanella loihica PV-4 around Shew_1077

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,239,549	-		Shew_1076	0.49	+0.4
1,239,580	-		Shew_1076	0.58	+0.2
1,239,870	-		Shew_1077	0.15	-0.8
1,239,882	+		Shew_1077	0.18	-0.3
1,240,232	-				+0.2
1,240,783	-		Shew_1078	0.68	+0.7
1,240,842	+		Shew_1078	0.77	+0.7
1,240,971	-				+0.7
1,241,040	-				-0.4
1,241,041	-				+0.4
1,241,086	+				+1.2
1,241,094	-				-0.0
1,241,099	-				+0.1
1,241,189	+				-0.2
1,241,197	-				+0.1