Strain Fitness in Shewanella loihica PV-4 around Shew_0945

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,084,547	-		Shew_0944	0.16	+0.3
1,085,032	+				-0.0
1,085,057	-				+0.3
1,085,080	+				-0.4
1,085,144	-				+0.4
1,085,184	-				+0.1
1,085,421	+		Shew_0945	0.11	-1.0
1,085,573	-		Shew_0945	0.35	-0.5
1,085,678	+		Shew_0945	0.52	-0.1
1,085,956	-				+0.3
1,086,113	-				+0.2
1,086,742	+		Shew_0946	0.39	+0.5
1,086,742	+		Shew_0946	0.39	+0.5