Strain Fitness in Shewanella loihica PV-4 around Shew_0933

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,066,196	-		Shew_0932	0.25	+0.2
1,066,713	-		Shew_0932	0.73	-0.4
1,066,784	+		Shew_0932	0.79	+0.7
1,067,103	+				-0.2
1,067,349	+		Shew_0933	0.45	-0.3
1,067,349	+		Shew_0933	0.45	-0.8
1,067,887	-				+0.6
1,067,987	-		Shew_0934	0.17	+0.2
1,068,174	+		Shew_0934	0.37	+0.0
1,068,293	+		Shew_0934	0.50	-0.0
1,068,301	-		Shew_0934	0.51	-0.3
1,068,574	-		Shew_0934	0.81	+0.7