Strain Fitness in Shewanella loihica PV-4 around Shew_0603

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
681,225	+				-0.1
681,288	+				+0.6
681,293	+				+0.4
681,695	-		Shew_0602	0.29	-0.0
681,793	+		Shew_0602	0.44	-0.2
681,950	-		Shew_0602	0.68	+0.1
681,999	-		Shew_0602	0.76	+0.3
682,135	-				+0.3
682,140	-				-0.1
682,229	+		Shew_0603	0.11	-1.2
682,309	+		Shew_0603	0.30	-0.1
682,318	+		Shew_0603	0.32	-0.0
682,813	-				-0.1
682,938	+		Shew_0604	0.11	-0.8
682,946	-		Shew_0604	0.12	+0.2
682,990	-		Shew_0604	0.14	+0.2
683,068	+		Shew_0604	0.20	+0.1
683,107	-		Shew_0604	0.22	-0.1