Strain Fitness in Shewanella loihica PV-4 around Shew_0196

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
201,399	+		Shew_0194	0.25	+2.7
201,790	+				+0.2
201,790	+				+0.3
201,790	+				+0.3
201,790	+				-0.1
201,959	+		Shew_0195	0.30	+1.1
202,258	+				+1.7
202,483	-		Shew_0196	0.33	+0.2
202,526	+		Shew_0196	0.40	-0.9
202,696	-		Shew_0196	0.69	-0.6