Experiment: MoLS4 with L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt glnH and DVU0387 are separated by 141 nucleotides DVU0387 and DVU0388 are separated by 8 nucleotides DVU0388 and DVU0389 overlap by 1 nucleotides DVU0389 and glcD are separated by 25 nucleotides
DVU0386: glnH - amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR), at 434,628 to 435,377
glnH
DVU0387: DVU0387 - amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR), at 435,519 to 436,196
DVU0387
DVU0388: DVU0388 - amino acid ABC transporter, ATP-binding protein (TIGR), at 436,205 to 436,972
DVU0388
DVU0389: DVU0389 - amino acid ABC tranporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR), at 436,972 to 437,646
DVU0389
DVU0390: glcD - glycolate oxidase, subunit GlcD, putative (TIGR), at 437,672 to 439,054
glcD
Position (kb) 436
437 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 435.307 kb on - strand at 435.320 kb on + strand at 435.328 kb on - strand at 435.391 kb on + strand at 435.391 kb on - strand at 435.399 kb on - strand at 435.594 kb on + strand, within DVU0387 at 435.594 kb on + strand, within DVU0387 at 435.594 kb on + strand, within DVU0387 at 435.627 kb on + strand, within DVU0387 at 435.627 kb on + strand, within DVU0387 at 435.650 kb on + strand, within DVU0387 at 435.650 kb on + strand, within DVU0387 at 435.658 kb on - strand, within DVU0387 at 435.658 kb on - strand, within DVU0387 at 435.658 kb on - strand, within DVU0387 at 435.658 kb on - strand, within DVU0387 at 435.658 kb on - strand, within DVU0387 at 435.677 kb on - strand, within DVU0387 at 435.796 kb on + strand, within DVU0387 at 435.852 kb on + strand, within DVU0387 at 435.875 kb on + strand, within DVU0387 at 435.896 kb on + strand, within DVU0387 at 435.920 kb on + strand, within DVU0387 at 435.928 kb on - strand, within DVU0387 at 435.979 kb on + strand, within DVU0387 at 435.987 kb on - strand, within DVU0387 at 435.989 kb on + strand, within DVU0387 at 436.074 kb on - strand, within DVU0387 at 436.112 kb on - strand, within DVU0387 at 436.137 kb on - strand at 436.215 kb on + strand at 436.228 kb on - strand at 436.229 kb on - strand at 436.266 kb on + strand at 436.324 kb on - strand, within DVU0388 at 436.360 kb on - strand, within DVU0388 at 436.360 kb on - strand, within DVU0388 at 436.362 kb on + strand, within DVU0388 at 436.429 kb on + strand, within DVU0388 at 436.429 kb on + strand, within DVU0388 at 436.534 kb on + strand, within DVU0388 at 436.622 kb on - strand, within DVU0388 at 436.627 kb on - strand, within DVU0388 at 436.644 kb on - strand, within DVU0388 at 436.644 kb on - strand, within DVU0388 at 436.681 kb on + strand, within DVU0388 at 436.690 kb on + strand, within DVU0388 at 436.724 kb on + strand, within DVU0388 at 436.731 kb on + strand, within DVU0388 at 436.852 kb on - strand, within DVU0388 at 436.879 kb on + strand, within DVU0388 at 436.976 kb on - strand at 437.016 kb on + strand at 437.018 kb on + strand at 437.071 kb on - strand, within DVU0389 at 437.116 kb on + strand, within DVU0389 at 437.124 kb on - strand, within DVU0389 at 437.154 kb on + strand, within DVU0389 at 437.162 kb on - strand, within DVU0389 at 437.181 kb on + strand, within DVU0389 at 437.181 kb on + strand, within DVU0389 at 437.181 kb on + strand, within DVU0389 at 437.205 kb on + strand, within DVU0389 at 437.245 kb on + strand, within DVU0389 at 437.260 kb on - strand, within DVU0389 at 437.270 kb on - strand, within DVU0389 at 437.270 kb on - strand, within DVU0389 at 437.270 kb on - strand, within DVU0389 at 437.299 kb on + strand, within DVU0389 at 437.317 kb on - strand, within DVU0389 at 437.320 kb on + strand, within DVU0389 at 437.325 kb on + strand, within DVU0389 at 437.325 kb on + strand, within DVU0389 at 437.333 kb on - strand, within DVU0389 at 437.358 kb on + strand, within DVU0389 at 437.358 kb on + strand, within DVU0389 at 437.358 kb on + strand, within DVU0389 at 437.366 kb on - strand, within DVU0389 at 437.366 kb on - strand, within DVU0389 at 437.366 kb on - strand, within DVU0389 at 437.366 kb on - strand, within DVU0389 at 437.499 kb on + strand, within DVU0389 at 437.564 kb on - strand, within DVU0389 at 437.597 kb on + strand at 437.649 kb on - strand at 437.660 kb on + strand at 437.668 kb on + strand at 437.676 kb on - strand at 437.676 kb on - strand at 437.789 kb on - strand at 437.916 kb on - strand, within glcD at 437.919 kb on + strand, within glcD at 437.937 kb on + strand, within glcD
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamine (N) remove 435,307 - +0.5 435,320 + +0.9 435,328 - -1.0 435,391 + +1.4 435,391 - +1.1 435,399 - +0.1 435,594 + DVU0387 0.11 +0.9 435,594 + DVU0387 0.11 +0.1 435,594 + DVU0387 0.11 -0.4 435,627 + DVU0387 0.16 +0.2 435,627 + DVU0387 0.16 -0.0 435,650 + DVU0387 0.19 +0.1 435,650 + DVU0387 0.19 +0.3 435,658 - DVU0387 0.21 -0.2 435,658 - DVU0387 0.21 -3.3 435,658 - DVU0387 0.21 -0.0 435,658 - DVU0387 0.21 +0.0 435,658 - DVU0387 0.21 -0.5 435,677 - DVU0387 0.23 +0.3 435,796 + DVU0387 0.41 +0.5 435,852 + DVU0387 0.49 -0.4 435,875 + DVU0387 0.53 +1.8 435,896 + DVU0387 0.56 -3.2 435,920 + DVU0387 0.59 +0.7 435,928 - DVU0387 0.60 -0.0 435,979 + DVU0387 0.68 -0.2 435,987 - DVU0387 0.69 -3.0 435,989 + DVU0387 0.69 +0.4 436,074 - DVU0387 0.82 +0.5 436,112 - DVU0387 0.87 +0.2 436,137 - +0.3 436,215 + -0.4 436,228 - -3.5 436,229 - -0.2 436,266 + -0.2 436,324 - DVU0388 0.15 -1.3 436,360 - DVU0388 0.20 -0.3 436,360 - DVU0388 0.20 -2.5 436,362 + DVU0388 0.20 -2.4 436,429 + DVU0388 0.29 -3.4 436,429 + DVU0388 0.29 +0.2 436,534 + DVU0388 0.43 +1.1 436,622 - DVU0388 0.54 -0.0 436,627 - DVU0388 0.55 -0.2 436,644 - DVU0388 0.57 +0.0 436,644 - DVU0388 0.57 -0.1 436,681 + DVU0388 0.62 -0.2 436,690 + DVU0388 0.63 -2.3 436,724 + DVU0388 0.68 -2.5 436,731 + DVU0388 0.68 -0.1 436,852 - DVU0388 0.84 -0.7 436,879 + DVU0388 0.88 -1.0 436,976 - +0.4 437,016 + -0.0 437,018 + +0.8 437,071 - DVU0389 0.15 -0.2 437,116 + DVU0389 0.21 -0.2 437,124 - DVU0389 0.23 -0.4 437,154 + DVU0389 0.27 -0.3 437,162 - DVU0389 0.28 +0.2 437,181 + DVU0389 0.31 +1.2 437,181 + DVU0389 0.31 +1.9 437,181 + DVU0389 0.31 -0.4 437,205 + DVU0389 0.35 -1.9 437,245 + DVU0389 0.40 +0.3 437,260 - DVU0389 0.43 -0.2 437,270 - DVU0389 0.44 +0.3 437,270 - DVU0389 0.44 +0.1 437,270 - DVU0389 0.44 +0.4 437,299 + DVU0389 0.48 +0.2 437,317 - DVU0389 0.51 +0.4 437,320 + DVU0389 0.52 -0.4 437,325 + DVU0389 0.52 +0.2 437,325 + DVU0389 0.52 +0.1 437,333 - DVU0389 0.53 -0.3 437,358 + DVU0389 0.57 -0.2 437,358 + DVU0389 0.57 +0.3 437,358 + DVU0389 0.57 -0.6 437,366 - DVU0389 0.58 +0.1 437,366 - DVU0389 0.58 -2.7 437,366 - DVU0389 0.58 +0.8 437,366 - DVU0389 0.58 -3.1 437,499 + DVU0389 0.78 -0.8 437,564 - DVU0389 0.88 +0.2 437,597 + -0.2 437,649 - -0.5 437,660 + +1.2 437,668 + -0.4 437,676 - +0.3 437,676 - +0.1 437,789 - -1.1 437,916 - glcD DVU0390 0.18 +0.3 437,919 + glcD DVU0390 0.18 -0.1 437,937 + glcD DVU0390 0.19 -0.3
Or see this region's nucleotide sequence