Experiment: MoLS4 with L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DORF40861 and DVU2312 are separated by 33 nucleotides DVU2312 and pgl are separated by 217 nucleotides
DORF40861: DORF40861 - SEED: FIG00604452: hypothetical protein, at 2,404,636 to 2,405,895
DORF40861
DVU2312: DVU2312 - hypothetical protein (TIGR), at 2,405,929 to 2,406,396
DVU2312
DVU2313: pgl - 6-phosphogluconolactonase (TIGR), at 2,406,614 to 2,407,363
pgl
Position (kb)
2405
2406
2407 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2404.976 kb on + strand, within DORF40861 at 2404.995 kb on + strand, within DORF40861 at 2404.999 kb on - strand, within DORF40861 at 2405.020 kb on + strand, within DORF40861 at 2405.028 kb on - strand, within DORF40861 at 2405.051 kb on - strand, within DORF40861 at 2405.052 kb on - strand, within DORF40861 at 2405.067 kb on + strand, within DORF40861 at 2405.093 kb on + strand, within DORF40861 at 2405.111 kb on + strand, within DORF40861 at 2405.119 kb on - strand, within DORF40861 at 2405.169 kb on - strand, within DORF40861 at 2405.169 kb on - strand, within DORF40861 at 2405.194 kb on + strand, within DORF40861 at 2405.207 kb on - strand, within DORF40861 at 2405.327 kb on + strand, within DORF40861 at 2405.463 kb on + strand, within DORF40861 at 2405.465 kb on + strand, within DORF40861 at 2405.528 kb on - strand, within DORF40861 at 2405.537 kb on - strand, within DORF40861 at 2405.567 kb on - strand, within DORF40861 at 2405.575 kb on + strand, within DORF40861 at 2405.640 kb on - strand, within DORF40861 at 2405.775 kb on - strand at 2405.785 kb on - strand at 2405.802 kb on - strand at 2405.842 kb on - strand at 2405.852 kb on - strand at 2405.931 kb on + strand at 2405.954 kb on - strand at 2405.954 kb on - strand at 2406.024 kb on + strand, within DVU2312 at 2406.132 kb on - strand, within DVU2312 at 2406.136 kb on + strand, within DVU2312 at 2406.166 kb on + strand, within DVU2312 at 2406.216 kb on + strand, within DVU2312 at 2406.308 kb on - strand, within DVU2312 at 2406.331 kb on + strand, within DVU2312 at 2406.336 kb on + strand, within DVU2312 at 2406.399 kb on - strand at 2406.399 kb on - strand at 2406.466 kb on - strand at 2406.535 kb on - strand at 2406.716 kb on - strand, within pgl at 2406.723 kb on - strand, within pgl at 2406.759 kb on + strand, within pgl at 2406.841 kb on - strand, within pgl at 2406.856 kb on - strand, within pgl at 2406.908 kb on - strand, within pgl at 2407.004 kb on + strand, within pgl at 2407.158 kb on - strand, within pgl at 2407.164 kb on + strand, within pgl at 2407.170 kb on + strand, within pgl at 2407.170 kb on + strand, within pgl at 2407.184 kb on + strand, within pgl
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamine (N) remove 2,404,976 + DORF40861 0.27 -0.1 2,404,995 + DORF40861 0.28 +0.1 2,404,999 - DORF40861 0.29 +0.3 2,405,020 + DORF40861 0.30 -0.2 2,405,028 - DORF40861 0.31 -0.3 2,405,051 - DORF40861 0.33 -0.1 2,405,052 - DORF40861 0.33 -3.0 2,405,067 + DORF40861 0.34 -0.1 2,405,093 + DORF40861 0.36 -2.5 2,405,111 + DORF40861 0.38 +0.4 2,405,119 - DORF40861 0.38 -3.0 2,405,169 - DORF40861 0.42 -2.5 2,405,169 - DORF40861 0.42 -3.4 2,405,194 + DORF40861 0.44 -2.3 2,405,207 - DORF40861 0.45 -0.2 2,405,327 + DORF40861 0.55 -0.7 2,405,463 + DORF40861 0.66 -2.5 2,405,465 + DORF40861 0.66 -0.0 2,405,528 - DORF40861 0.71 +0.1 2,405,537 - DORF40861 0.72 +0.1 2,405,567 - DORF40861 0.74 -3.9 2,405,575 + DORF40861 0.75 +0.1 2,405,640 - DORF40861 0.80 -2.5 2,405,775 - +0.1 2,405,785 - -0.4 2,405,802 - -0.1 2,405,842 - -0.3 2,405,852 - +1.0 2,405,931 + +0.2 2,405,954 - -0.0 2,405,954 - -3.9 2,406,024 + DVU2312 0.20 +0.3 2,406,132 - DVU2312 0.43 +0.9 2,406,136 + DVU2312 0.44 +0.1 2,406,166 + DVU2312 0.51 +0.2 2,406,216 + DVU2312 0.61 -0.2 2,406,308 - DVU2312 0.81 +0.5 2,406,331 + DVU2312 0.86 +0.4 2,406,336 + DVU2312 0.87 +0.2 2,406,399 - -0.1 2,406,399 - +0.3 2,406,466 - -0.8 2,406,535 - -0.1 2,406,716 - pgl DVU2313 0.14 +0.2 2,406,723 - pgl DVU2313 0.15 -0.5 2,406,759 + pgl DVU2313 0.19 -0.1 2,406,841 - pgl DVU2313 0.30 +0.1 2,406,856 - pgl DVU2313 0.32 -0.3 2,406,908 - pgl DVU2313 0.39 -0.6 2,407,004 + pgl DVU2313 0.52 +0.4 2,407,158 - pgl DVU2313 0.73 +0.7 2,407,164 + pgl DVU2313 0.73 +0.9 2,407,170 + pgl DVU2313 0.74 -0.6 2,407,170 + pgl DVU2313 0.74 +0.1 2,407,184 + pgl DVU2313 0.76 -3.3
Or see this region's nucleotide sequence