Experiment: MoLS4 with L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1746 and DVU1747 are separated by 40 nucleotides DVU1747 and DVU1748 overlap by 20 nucleotides
DVU1746: DVU1746 - C-5 cytosine-specific DNA methylase family protein (TIGR), at 1,812,266 to 1,813,375
DVU1746
DVU1747: DVU1747 - ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein (TIGR), at 1,813,416 to 1,816,361
DVU1747
DVU1748: DVU1748 - conserved hypothetical protein (TIGR), at 1,816,342 to 1,818,114
DVU1748
Position (kb)
1813
1814
1815
1816
1817 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1812.486 kb on + strand, within DVU1746 at 1812.579 kb on - strand, within DVU1746 at 1812.749 kb on - strand, within DVU1746 at 1812.840 kb on - strand, within DVU1746 at 1812.927 kb on - strand, within DVU1746 at 1813.207 kb on + strand, within DVU1746 at 1813.207 kb on + strand, within DVU1746 at 1813.288 kb on - strand at 1813.297 kb on + strand at 1813.517 kb on - strand at 1813.621 kb on + strand at 1813.651 kb on - strand at 1813.655 kb on + strand at 1813.655 kb on + strand at 1813.749 kb on + strand, within DVU1747 at 1813.763 kb on + strand, within DVU1747 at 1813.780 kb on + strand, within DVU1747 at 1813.804 kb on - strand, within DVU1747 at 1813.804 kb on - strand, within DVU1747 at 1813.804 kb on - strand, within DVU1747 at 1813.804 kb on - strand, within DVU1747 at 1813.804 kb on - strand, within DVU1747 at 1813.805 kb on - strand, within DVU1747 at 1813.845 kb on - strand, within DVU1747 at 1813.987 kb on - strand, within DVU1747 at 1813.994 kb on + strand, within DVU1747 at 1814.052 kb on - strand, within DVU1747 at 1814.066 kb on - strand, within DVU1747 at 1814.068 kb on + strand, within DVU1747 at 1814.068 kb on + strand, within DVU1747 at 1814.068 kb on + strand, within DVU1747 at 1814.068 kb on + strand, within DVU1747 at 1814.135 kb on + strand, within DVU1747 at 1814.143 kb on - strand, within DVU1747 at 1814.709 kb on + strand, within DVU1747 at 1814.727 kb on - strand, within DVU1747 at 1814.782 kb on + strand, within DVU1747 at 1814.802 kb on - strand, within DVU1747 at 1814.807 kb on + strand, within DVU1747 at 1814.937 kb on - strand, within DVU1747 at 1815.079 kb on - strand, within DVU1747 at 1815.119 kb on - strand, within DVU1747 at 1815.229 kb on - strand, within DVU1747 at 1815.229 kb on - strand, within DVU1747 at 1815.240 kb on + strand, within DVU1747 at 1815.254 kb on - strand, within DVU1747 at 1815.262 kb on + strand, within DVU1747 at 1815.293 kb on + strand, within DVU1747 at 1815.293 kb on + strand, within DVU1747 at 1815.301 kb on - strand, within DVU1747 at 1815.403 kb on + strand, within DVU1747 at 1815.411 kb on - strand, within DVU1747 at 1815.411 kb on - strand, within DVU1747 at 1815.420 kb on - strand, within DVU1747 at 1815.438 kb on - strand, within DVU1747 at 1815.629 kb on + strand, within DVU1747 at 1816.222 kb on + strand at 1816.230 kb on - strand at 1816.295 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamine (N) remove 1,812,486 + DVU1746 0.20 -0.3 1,812,579 - DVU1746 0.28 -0.9 1,812,749 - DVU1746 0.44 -0.2 1,812,840 - DVU1746 0.52 -0.4 1,812,927 - DVU1746 0.60 -0.4 1,813,207 + DVU1746 0.85 +0.3 1,813,207 + DVU1746 0.85 -0.4 1,813,288 - -0.2 1,813,297 + -0.5 1,813,517 - -0.5 1,813,621 + -0.6 1,813,651 - -0.4 1,813,655 + -0.8 1,813,655 + -0.5 1,813,749 + DVU1747 0.11 +1.1 1,813,763 + DVU1747 0.12 -2.6 1,813,780 + DVU1747 0.12 -3.1 1,813,804 - DVU1747 0.13 -0.4 1,813,804 - DVU1747 0.13 +0.1 1,813,804 - DVU1747 0.13 -0.5 1,813,804 - DVU1747 0.13 -1.6 1,813,804 - DVU1747 0.13 +0.1 1,813,805 - DVU1747 0.13 +0.8 1,813,845 - DVU1747 0.15 -2.1 1,813,987 - DVU1747 0.19 -0.6 1,813,994 + DVU1747 0.20 +0.1 1,814,052 - DVU1747 0.22 -1.9 1,814,066 - DVU1747 0.22 -0.6 1,814,068 + DVU1747 0.22 -0.1 1,814,068 + DVU1747 0.22 -0.2 1,814,068 + DVU1747 0.22 -2.6 1,814,068 + DVU1747 0.22 -0.9 1,814,135 + DVU1747 0.24 -2.8 1,814,143 - DVU1747 0.25 -2.6 1,814,709 + DVU1747 0.44 -1.2 1,814,727 - DVU1747 0.45 -0.1 1,814,782 + DVU1747 0.46 -0.4 1,814,802 - DVU1747 0.47 -0.4 1,814,807 + DVU1747 0.47 -0.1 1,814,937 - DVU1747 0.52 +0.8 1,815,079 - DVU1747 0.56 -0.1 1,815,119 - DVU1747 0.58 -0.5 1,815,229 - DVU1747 0.62 -2.9 1,815,229 - DVU1747 0.62 +0.3 1,815,240 + DVU1747 0.62 -2.9 1,815,254 - DVU1747 0.62 -0.4 1,815,262 + DVU1747 0.63 -3.1 1,815,293 + DVU1747 0.64 +0.5 1,815,293 + DVU1747 0.64 -0.4 1,815,301 - DVU1747 0.64 -0.4 1,815,403 + DVU1747 0.67 -0.7 1,815,411 - DVU1747 0.68 -1.2 1,815,411 - DVU1747 0.68 -1.3 1,815,420 - DVU1747 0.68 -0.6 1,815,438 - DVU1747 0.69 -0.0 1,815,629 + DVU1747 0.75 -2.0 1,816,222 + -0.7 1,816,230 - -0.1 1,816,295 - -0.5
Or see this region's nucleotide sequence