Experiment: Furfuryl Alcohol 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1159 and Ga0059261_1160 overlap by 1 nucleotides Ga0059261_1160 and Ga0059261_1161 are separated by 18 nucleotides Ga0059261_1161 and Ga0059261_1162 overlap by 4 nucleotides
Ga0059261_1159: Ga0059261_1159 - Asparaginase, at 1,186,535 to 1,188,454
_1159
Ga0059261_1160: Ga0059261_1160 - Transcriptional regulators, at 1,188,454 to 1,188,897
_1160
Ga0059261_1161: Ga0059261_1161 - Cu(I)-responsive transcriptional regulator, at 1,188,916 to 1,189,413
_1161
Ga0059261_1162: Ga0059261_1162 - copper-(or silver)-translocating P-type ATPase, at 1,189,410 to 1,191,944
_1162
Position (kb)
1188
1189
1190 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1188.036 kb on + strand, within Ga0059261_1159 at 1188.037 kb on - strand, within Ga0059261_1159 at 1188.037 kb on - strand, within Ga0059261_1159 at 1188.064 kb on + strand, within Ga0059261_1159 at 1188.148 kb on + strand, within Ga0059261_1159 at 1188.148 kb on + strand, within Ga0059261_1159 at 1188.148 kb on + strand, within Ga0059261_1159 at 1188.148 kb on + strand, within Ga0059261_1159 at 1188.148 kb on + strand, within Ga0059261_1159 at 1188.148 kb on + strand, within Ga0059261_1159 at 1188.149 kb on - strand, within Ga0059261_1159 at 1188.149 kb on - strand, within Ga0059261_1159 at 1188.152 kb on + strand, within Ga0059261_1159 at 1188.152 kb on + strand, within Ga0059261_1159 at 1188.152 kb on + strand, within Ga0059261_1159 at 1188.152 kb on + strand, within Ga0059261_1159 at 1188.152 kb on + strand at 1188.152 kb on + strand, within Ga0059261_1159 at 1188.153 kb on - strand, within Ga0059261_1159 at 1188.153 kb on - strand, within Ga0059261_1159 at 1188.153 kb on - strand, within Ga0059261_1159 at 1188.153 kb on - strand, within Ga0059261_1159 at 1188.153 kb on - strand, within Ga0059261_1159 at 1188.153 kb on - strand, within Ga0059261_1159 at 1188.153 kb on - strand, within Ga0059261_1159 at 1188.153 kb on - strand, within Ga0059261_1159 at 1188.200 kb on + strand, within Ga0059261_1159 at 1188.200 kb on + strand, within Ga0059261_1159 at 1188.200 kb on + strand, within Ga0059261_1159 at 1188.201 kb on - strand, within Ga0059261_1159 at 1188.201 kb on - strand, within Ga0059261_1159 at 1188.201 kb on - strand, within Ga0059261_1159 at 1188.285 kb on - strand at 1188.297 kb on + strand at 1188.297 kb on + strand at 1188.298 kb on - strand at 1188.380 kb on + strand at 1188.380 kb on + strand at 1188.380 kb on + strand at 1188.380 kb on + strand at 1188.380 kb on + strand at 1188.380 kb on + strand at 1188.380 kb on + strand at 1188.380 kb on + strand at 1188.380 kb on + strand at 1188.381 kb on - strand at 1188.574 kb on + strand, within Ga0059261_1160 at 1188.574 kb on + strand, within Ga0059261_1160 at 1188.619 kb on + strand, within Ga0059261_1160 at 1188.619 kb on + strand, within Ga0059261_1160 at 1188.619 kb on + strand, within Ga0059261_1160 at 1188.620 kb on - strand, within Ga0059261_1160 at 1188.620 kb on - strand, within Ga0059261_1160 at 1188.620 kb on - strand, within Ga0059261_1160 at 1188.620 kb on - strand, within Ga0059261_1160 at 1188.620 kb on - strand, within Ga0059261_1160 at 1188.620 kb on - strand, within Ga0059261_1160 at 1188.620 kb on - strand, within Ga0059261_1160 at 1188.621 kb on + strand, within Ga0059261_1160 at 1188.621 kb on + strand, within Ga0059261_1160 at 1188.621 kb on + strand, within Ga0059261_1160 at 1188.621 kb on + strand at 1188.621 kb on + strand, within Ga0059261_1160 at 1188.622 kb on - strand, within Ga0059261_1160 at 1188.622 kb on - strand, within Ga0059261_1160 at 1188.622 kb on - strand, within Ga0059261_1160 at 1188.622 kb on - strand, within Ga0059261_1160 at 1188.622 kb on - strand, within Ga0059261_1160 at 1188.622 kb on - strand, within Ga0059261_1160 at 1188.622 kb on - strand, within Ga0059261_1160 at 1188.772 kb on + strand at 1188.772 kb on + strand, within Ga0059261_1160 at 1188.772 kb on + strand, within Ga0059261_1160 at 1188.773 kb on - strand, within Ga0059261_1160 at 1188.773 kb on - strand, within Ga0059261_1160 at 1188.773 kb on - strand, within Ga0059261_1160 at 1188.774 kb on + strand, within Ga0059261_1160 at 1188.774 kb on + strand, within Ga0059261_1160 at 1188.774 kb on + strand, within Ga0059261_1160 at 1188.775 kb on - strand, within Ga0059261_1160 at 1188.775 kb on - strand, within Ga0059261_1160 at 1188.775 kb on - strand, within Ga0059261_1160 at 1188.775 kb on - strand, within Ga0059261_1160 at 1189.129 kb on - strand, within Ga0059261_1161 at 1189.299 kb on - strand, within Ga0059261_1161 at 1189.299 kb on - strand, within Ga0059261_1161 at 1189.299 kb on - strand, within Ga0059261_1161 at 1189.299 kb on - strand, within Ga0059261_1161 at 1189.299 kb on - strand, within Ga0059261_1161 at 1189.299 kb on - strand, within Ga0059261_1161 at 1189.307 kb on + strand, within Ga0059261_1161 at 1189.355 kb on + strand, within Ga0059261_1161 at 1189.355 kb on + strand, within Ga0059261_1161 at 1189.355 kb on + strand, within Ga0059261_1161 at 1189.356 kb on - strand, within Ga0059261_1161 at 1189.356 kb on - strand, within Ga0059261_1161 at 1189.356 kb on - strand, within Ga0059261_1161 at 1189.358 kb on + strand, within Ga0059261_1161 at 1189.359 kb on - strand, within Ga0059261_1161 at 1189.393 kb on - strand at 1189.393 kb on - strand at 1189.597 kb on + strand at 1189.597 kb on + strand at 1189.598 kb on - strand at 1189.598 kb on - strand at 1189.627 kb on - strand at 1189.728 kb on - strand, within Ga0059261_1162 at 1190.047 kb on + strand, within Ga0059261_1162 at 1190.047 kb on + strand, within Ga0059261_1162 at 1190.047 kb on + strand, within Ga0059261_1162 at 1190.047 kb on + strand, within Ga0059261_1162 at 1190.048 kb on - strand, within Ga0059261_1162 at 1190.048 kb on - strand, within Ga0059261_1162 at 1190.048 kb on - strand, within Ga0059261_1162 at 1190.048 kb on - strand, within Ga0059261_1162 at 1190.313 kb on - strand, within Ga0059261_1162
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.125 vol% remove 1,188,036 + Ga0059261_1159 0.78 +0.0 1,188,037 - Ga0059261_1159 0.78 -0.6 1,188,037 - Ga0059261_1159 0.78 -0.3 1,188,064 + Ga0059261_1159 0.80 -0.4 1,188,148 + Ga0059261_1159 0.84 +0.0 1,188,148 + Ga0059261_1159 0.84 +0.3 1,188,148 + Ga0059261_1159 0.84 -0.7 1,188,148 + Ga0059261_1159 0.84 +1.2 1,188,148 + Ga0059261_1159 0.84 +0.3 1,188,148 + Ga0059261_1159 0.84 -0.3 1,188,149 - Ga0059261_1159 0.84 -0.1 1,188,149 - Ga0059261_1159 0.84 -0.0 1,188,152 + Ga0059261_1159 0.84 +0.1 1,188,152 + Ga0059261_1159 0.84 +0.7 1,188,152 + Ga0059261_1159 0.84 +0.5 1,188,152 + Ga0059261_1159 0.84 +0.3 1,188,152 + -0.1 1,188,152 + Ga0059261_1159 0.84 -0.5 1,188,153 - Ga0059261_1159 0.84 +0.2 1,188,153 - Ga0059261_1159 0.84 +0.3 1,188,153 - Ga0059261_1159 0.84 -0.7 1,188,153 - Ga0059261_1159 0.84 -1.1 1,188,153 - Ga0059261_1159 0.84 -0.5 1,188,153 - Ga0059261_1159 0.84 +0.2 1,188,153 - Ga0059261_1159 0.84 -0.1 1,188,153 - Ga0059261_1159 0.84 -1.1 1,188,200 + Ga0059261_1159 0.87 +0.0 1,188,200 + Ga0059261_1159 0.87 -0.0 1,188,200 + Ga0059261_1159 0.87 -1.2 1,188,201 - Ga0059261_1159 0.87 -0.6 1,188,201 - Ga0059261_1159 0.87 -0.6 1,188,201 - Ga0059261_1159 0.87 +0.9 1,188,285 - +0.2 1,188,297 + +0.2 1,188,297 + +0.6 1,188,298 - +0.2 1,188,380 + +0.0 1,188,380 + -0.4 1,188,380 + -0.0 1,188,380 + +2.2 1,188,380 + -0.3 1,188,380 + -0.7 1,188,380 + -0.4 1,188,380 + -0.1 1,188,380 + +0.0 1,188,381 - +0.9 1,188,574 + Ga0059261_1160 0.27 -0.1 1,188,574 + Ga0059261_1160 0.27 +0.7 1,188,619 + Ga0059261_1160 0.37 +0.4 1,188,619 + Ga0059261_1160 0.37 -0.3 1,188,619 + Ga0059261_1160 0.37 -0.4 1,188,620 - Ga0059261_1160 0.37 +0.4 1,188,620 - Ga0059261_1160 0.37 +0.9 1,188,620 - Ga0059261_1160 0.37 +0.3 1,188,620 - Ga0059261_1160 0.37 -0.5 1,188,620 - Ga0059261_1160 0.37 -0.6 1,188,620 - Ga0059261_1160 0.37 -0.2 1,188,620 - Ga0059261_1160 0.37 -0.6 1,188,621 + Ga0059261_1160 0.38 -2.9 1,188,621 + Ga0059261_1160 0.38 +0.3 1,188,621 + Ga0059261_1160 0.38 -0.1 1,188,621 + +1.9 1,188,621 + Ga0059261_1160 0.38 -1.5 1,188,622 - Ga0059261_1160 0.38 +0.4 1,188,622 - Ga0059261_1160 0.38 +0.4 1,188,622 - Ga0059261_1160 0.38 -0.4 1,188,622 - Ga0059261_1160 0.38 -0.0 1,188,622 - Ga0059261_1160 0.38 -0.0 1,188,622 - Ga0059261_1160 0.38 -0.4 1,188,622 - Ga0059261_1160 0.38 +0.3 1,188,772 + -0.1 1,188,772 + Ga0059261_1160 0.72 -0.6 1,188,772 + Ga0059261_1160 0.72 +0.3 1,188,773 - Ga0059261_1160 0.72 -0.3 1,188,773 - Ga0059261_1160 0.72 +0.2 1,188,773 - Ga0059261_1160 0.72 -0.1 1,188,774 + Ga0059261_1160 0.72 -0.1 1,188,774 + Ga0059261_1160 0.72 -1.1 1,188,774 + Ga0059261_1160 0.72 +0.4 1,188,775 - Ga0059261_1160 0.72 +0.2 1,188,775 - Ga0059261_1160 0.72 -0.0 1,188,775 - Ga0059261_1160 0.72 +0.1 1,188,775 - Ga0059261_1160 0.72 +0.0 1,189,129 - Ga0059261_1161 0.43 -0.7 1,189,299 - Ga0059261_1161 0.77 +0.4 1,189,299 - Ga0059261_1161 0.77 +0.7 1,189,299 - Ga0059261_1161 0.77 +0.7 1,189,299 - Ga0059261_1161 0.77 -0.2 1,189,299 - Ga0059261_1161 0.77 +0.8 1,189,299 - Ga0059261_1161 0.77 -0.2 1,189,307 + Ga0059261_1161 0.79 -0.4 1,189,355 + Ga0059261_1161 0.88 -0.1 1,189,355 + Ga0059261_1161 0.88 +0.2 1,189,355 + Ga0059261_1161 0.88 -0.7 1,189,356 - Ga0059261_1161 0.88 +0.4 1,189,356 - Ga0059261_1161 0.88 +0.2 1,189,356 - Ga0059261_1161 0.88 +0.5 1,189,358 + Ga0059261_1161 0.89 +0.1 1,189,359 - Ga0059261_1161 0.89 -0.3 1,189,393 - +0.9 1,189,393 - -0.3 1,189,597 + +0.3 1,189,597 + -0.6 1,189,598 - +0.6 1,189,598 - +0.5 1,189,627 - +0.4 1,189,728 - Ga0059261_1162 0.13 -0.0 1,190,047 + Ga0059261_1162 0.25 +0.4 1,190,047 + Ga0059261_1162 0.25 +0.3 1,190,047 + Ga0059261_1162 0.25 -1.5 1,190,047 + Ga0059261_1162 0.25 -0.2 1,190,048 - Ga0059261_1162 0.25 +0.3 1,190,048 - Ga0059261_1162 0.25 +0.2 1,190,048 - Ga0059261_1162 0.25 +0.6 1,190,048 - Ga0059261_1162 0.25 +2.3 1,190,313 - Ga0059261_1162 0.36 -0.4
Or see this region's nucleotide sequence