Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03944

Experiment: PYE with Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 5 vol%
1,020,471	+		CCNA_00943	0.53	-1.0
1,020,474	-		CCNA_00943	0.53	+1.4
1,020,479	-		CCNA_00943	0.53	+1.0
1,020,489	+		CCNA_00943	0.54	+0.8
1,020,494	+		CCNA_00943	0.54	+0.2
1,020,509	+		CCNA_00943	0.55	-0.2
1,020,509	+		CCNA_00943	0.55	+0.2
1,020,517	-		CCNA_00943	0.55	+0.9
1,020,575	+		CCNA_00943	0.58	+0.0
1,020,599	+		CCNA_00943	0.59	+0.2
1,020,615	-		CCNA_00943	0.60	+1.3
1,020,617	+		CCNA_00943	0.60	+2.0
1,020,617	+		CCNA_00943	0.60	+2.2
1,020,622	+		CCNA_00943	0.60	-0.2
1,020,630	-		CCNA_00943	0.60	+1.2
1,020,643	-		CCNA_00943	0.61	+0.5
1,020,674	-		CCNA_00943	0.62	+0.6
1,020,679	+		CCNA_00943	0.63	-0.9
1,020,709	+		CCNA_00943	0.64	-2.0
1,020,714	+		CCNA_00943	0.64	-1.0
1,020,735	+		CCNA_00943	0.65	-0.9
1,020,773	+		CCNA_00943	0.67	-1.2
1,020,774	+		CCNA_00943	0.67	-0.4
1,020,774	+		CCNA_00943	0.67	+0.2
1,020,774	+		CCNA_00943	0.67	-3.0
1,020,782	-		CCNA_00943	0.68	+1.1
1,020,782	-		CCNA_00943	0.68	-1.3
1,020,782	-		CCNA_00943	0.68	+0.8
1,020,797	+		CCNA_00943	0.68	-1.2
1,020,797	-		CCNA_00943	0.68	+1.1
1,020,802	+		CCNA_00943	0.69	+1.0
1,020,805	-		CCNA_00943	0.69	+0.5
1,020,810	-		CCNA_00943	0.69	+0.1
1,020,821	-		CCNA_00943	0.69	+1.0
1,020,841	+		CCNA_00943	0.70	+0.8
1,020,849	-		CCNA_00943	0.71	+1.0
1,020,849	-		CCNA_00943	0.71	+0.0
1,020,867	+		CCNA_00943	0.72	-0.8
1,020,867	+		CCNA_00943	0.72	+0.8
1,020,867	+		CCNA_00943	0.72	-1.6
1,020,867	+		CCNA_00943	0.72	-0.8
1,020,867	+		CCNA_00943	0.72	-1.2
1,020,875	-		CCNA_00943	0.72	+2.0
1,020,875	-		CCNA_00943	0.72	+0.8
1,020,875	-		CCNA_00943	0.72	+1.1
1,020,875	-		CCNA_00943	0.72	+0.7
1,020,875	-		CCNA_00943	0.72	+1.2
1,020,875	-		CCNA_00943	0.72	+0.8
1,020,875	-		CCNA_00943	0.72	+0.8
1,020,875	-		CCNA_00943	0.72	+0.3
1,020,907	+		CCNA_00943	0.73	-0.9
1,020,915	-		CCNA_00943	0.74	+0.1
1,020,915	-		CCNA_00943	0.74	+1.4
1,020,956	+		CCNA_00943	0.76	+0.3
1,020,958	+		CCNA_00943	0.76	-0.2
1,020,958	+		CCNA_00943	0.76	+0.8
1,020,966	-		CCNA_00943	0.76	+0.8
1,021,008	-		CCNA_00943	0.78	+0.3
1,021,010	+		CCNA_00943	0.78	-0.3
1,021,065	+		CCNA_00943	0.81	+0.2
1,021,070	+		CCNA_00943	0.81	+0.2
1,021,070	+		CCNA_00943	0.81	-1.3
1,021,073	-		CCNA_00943	0.81	+0.7
1,021,078	-		CCNA_00943	0.82	+0.4
1,021,086	-		CCNA_00943	0.82	+0.8
1,021,126	+		CCNA_00943	0.84	-1.3
1,021,134	-		CCNA_00943	0.84	+1.0
1,021,134	-		CCNA_00943	0.84	+0.4
1,021,145	-		CCNA_00943	0.85	+0.5
1,021,165	+		CCNA_00943	0.86	+2.2
1,021,187	+		CCNA_00943	0.87	-0.2
1,021,279	-				+1.6
1,021,279	-				+0.3
1,021,283	+				-0.5
1,021,323	+				-1.6
1,021,326	-				+0.2
1,021,374	+				+0.1
1,021,377	-				-0.6
1,021,394	-				-0.7
1,021,401	+				-1.6
1,021,409	-				+0.2
1,021,409	-				-0.1
1,021,463	+				-2.6
1,021,468	+				-0.8
1,021,471	-				-0.3
1,021,476	-				-0.3
1,021,486	-		CCNA_03944	0.14	+1.1
1,021,565	+		CCNA_03944	0.81	+1.8
1,021,803	+				+1.7
1,021,870	+				+1.8
1,021,962	+				+1.7
1,021,965	-				+0.5
1,021,982	+				+1.3
1,022,016	-		CCNA_00944	0.12	-0.2
1,022,095	-		CCNA_00944	0.19	-0.5
1,022,110	+		CCNA_00944	0.20	+2.2
1,022,110	+		CCNA_00944	0.20	+2.2
1,022,115	+		CCNA_00944	0.21	+1.7
1,022,261	-		CCNA_00944	0.33	-0.5
1,022,321	+		CCNA_00944	0.38	+2.2
1,022,389	+		CCNA_00944	0.43	+1.9
1,022,409	+		CCNA_00944	0.45	+1.9
1,022,426	-		CCNA_00944	0.46	-2.1
1,022,443	+		CCNA_00944	0.48	+2.2
1,022,446	-		CCNA_00944	0.48	-2.1
1,022,446	-		CCNA_00944	0.48	-1.3
1,022,479	+		CCNA_00944	0.51	+2.0
1,022,489	+		CCNA_00944	0.52	+1.9
1,022,504	+		CCNA_00944	0.53	+1.7
1,022,510	-				+1.8
1,022,516	-		CCNA_00944	0.54	-0.8
1,022,525	+		CCNA_00944	0.55	+0.6
1,022,536	+		CCNA_00944	0.56	+1.9
1,022,546	+		CCNA_00944	0.56	+1.8
1,022,553	+		CCNA_00944	0.57	+1.9