Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4255

Experiment: KB with Rotenone 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rotenone 0.125 mg/ml
5,072,008	+				+0.3
5,072,016	+				-0.7
5,072,016	+				+0.1
5,072,017	-				-0.5
5,072,017	-				+0.7
5,072,017	-				+0.2
5,072,017	-				+0.7
5,072,017	-				-0.5
5,072,077	+				-0.3
5,072,078	-				-0.1
5,072,078	-				+0.6
5,072,208	+				-1.1
5,072,208	+				-0.9
5,072,208	+				+1.3
5,072,208	+				+1.4
5,072,216	+				-0.7
5,072,216	+				+0.2
5,072,216	+				+0.4
5,072,217	-				+0.3
5,072,220	+				+0.7
5,072,220	+				+0.7
5,072,221	-				-0.8
5,072,257	+				+0.5
5,072,258	-				+1.2
5,072,258	-				+0.7
5,072,277	+				+1.7
5,072,277	+				-0.7
5,072,277	+				+0.5
5,072,278	-				-1.0
5,072,424	+				-1.5
5,072,425	-				+0.3
5,072,512	+				-0.7
5,072,512	+				-2.7
5,072,512	+				-0.0
5,072,512	+				+0.2
5,072,512	+				+0.1
5,072,512	+				+1.0
5,072,512	+				-0.9
5,072,513	-				+1.4
5,072,513	-				-0.3
5,072,568	+				-0.1
5,072,568	+				+0.0
5,072,568	+				-0.3
5,072,568	+				-0.9
5,072,568	+				+0.1
5,072,568	+				+0.7
5,072,569	-				+0.8
5,072,569	-				-0.0
5,072,569	-				+0.2
5,072,569	-				+1.8
5,072,569	-				+0.6
5,072,569	-				-1.5
5,072,569	-				+0.9
5,072,569	-				+0.9
5,072,569	-				-0.2
5,072,569	-				+0.1
5,072,569	-				-0.5
5,072,569	-				+0.6
5,072,605	-		Psyr_4254	0.18	+3.2
5,072,674	+		Psyr_4254	0.46	-0.1
5,072,767	-		Psyr_4254	0.84	-0.3
5,072,945	-				-0.2
5,072,945	-				-0.7
5,072,960	+		Psyr_4255	0.12	-1.3
5,073,080	+		Psyr_4255	0.32	+0.4
5,073,081	-		Psyr_4255	0.32	+0.5
5,073,081	-		Psyr_4255	0.32	-0.3
5,073,122	+		Psyr_4255	0.39	-0.5
5,073,134	-		Psyr_4255	0.40	-0.9
5,073,242	+		Psyr_4255	0.58	-1.1
5,073,459	-				-1.1
5,073,525	-				-0.0
5,073,525	-				-0.1
5,073,525	-				+0.9
5,073,525	-				-0.2
5,073,577	-				-0.9
5,073,577	-				-0.5
5,073,577	-				-0.1
5,073,604	+				-1.0
5,073,628	+				-0.2
5,073,628	+				-1.1
5,073,629	-				+1.2
5,073,644	-				+0.3
5,073,757	-		Psyr_4256	0.33	+0.3
5,073,773	+		Psyr_4256	0.38	-0.3
5,073,773	+		Psyr_4256	0.38	+1.3
5,073,774	-		Psyr_4256	0.38	-0.7
5,073,882	+		Psyr_4256	0.73	+0.0
5,073,882	+		Psyr_4256	0.73	+0.0
5,073,882	+		Psyr_4256	0.73	+3.7
5,073,882	+		Psyr_4256	0.73	+1.2
5,073,882	+		Psyr_4256	0.73	-0.5
5,073,882	+		Psyr_4256	0.73	+2.4
5,073,882	+		Psyr_4256	0.73	+0.3
5,073,883	-		Psyr_4256	0.73	+2.4
5,073,883	-		Psyr_4256	0.73	-2.0
5,073,883	-		Psyr_4256	0.73	-0.7
5,073,883	-		Psyr_4256	0.73	+0.4
5,073,958	-				+0.9
5,073,958	-				-1.6
5,074,011	+				-0.9
5,074,012	-				-0.7
5,074,012	-				-0.5
5,074,099	-				-0.6
5,074,146	+		Psyr_4257	0.15	+0.2
5,074,146	+		Psyr_4257	0.15	-0.6
5,074,146	+		Psyr_4257	0.15	+0.1
5,074,146	+		Psyr_4257	0.15	+0.1
5,074,147	-		Psyr_4257	0.15	+2.7
5,074,147	-		Psyr_4257	0.15	-0.1
5,074,147	-		Psyr_4257	0.15	-1.4
5,074,147	-		Psyr_4257	0.15	-0.8
5,074,159	-		Psyr_4257	0.18	-0.4