Experiment: KB with Rotenone 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4052 and Psyr_4053 are separated by 21 nucleotides Psyr_4053 and Psyr_4054 are separated by 73 nucleotides Psyr_4054 and Psyr_4055 are separated by 136 nucleotides
Psyr_4052: Psyr_4052 - General substrate transporter:Major facilitator superfamily, at 4,834,440 to 4,835,606
_4052
Psyr_4053: Psyr_4053 - NADH:flavin oxidoreductase/NADH oxidase, at 4,835,628 to 4,836,677
_4053
Psyr_4054: Psyr_4054 - hypothetical protein, at 4,836,751 to 4,837,512
_4054
Psyr_4055: Psyr_4055 - conserved domain protein, at 4,837,649 to 4,838,500
_4055
Position (kb) 4835
4836
4837 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 4834.710 kb on + strand, within Psyr_4052 at 4834.710 kb on + strand, within Psyr_4052 at 4834.711 kb on - strand, within Psyr_4052 at 4834.711 kb on - strand, within Psyr_4052 at 4834.861 kb on + strand, within Psyr_4052 at 4834.862 kb on - strand, within Psyr_4052 at 4835.100 kb on + strand, within Psyr_4052 at 4835.100 kb on + strand, within Psyr_4052 at 4835.100 kb on + strand, within Psyr_4052 at 4835.100 kb on + strand, within Psyr_4052 at 4835.100 kb on + strand, within Psyr_4052 at 4835.100 kb on + strand, within Psyr_4052 at 4835.100 kb on + strand, within Psyr_4052 at 4835.100 kb on + strand, within Psyr_4052 at 4835.100 kb on + strand, within Psyr_4052 at 4835.100 kb on + strand, within Psyr_4052 at 4835.100 kb on + strand, within Psyr_4052 at 4835.100 kb on + strand, within Psyr_4052 at 4835.100 kb on + strand, within Psyr_4052 at 4835.100 kb on + strand, within Psyr_4052 at 4835.101 kb on - strand, within Psyr_4052 at 4835.101 kb on - strand, within Psyr_4052 at 4835.101 kb on - strand, within Psyr_4052 at 4835.101 kb on - strand, within Psyr_4052 at 4835.101 kb on - strand, within Psyr_4052 at 4835.101 kb on - strand, within Psyr_4052 at 4835.101 kb on - strand, within Psyr_4052 at 4835.101 kb on - strand, within Psyr_4052 at 4835.101 kb on - strand, within Psyr_4052 at 4835.101 kb on - strand, within Psyr_4052 at 4835.135 kb on - strand, within Psyr_4052 at 4835.135 kb on - strand, within Psyr_4052 at 4835.278 kb on + strand, within Psyr_4052 at 4835.558 kb on + strand at 4835.559 kb on - strand at 4835.598 kb on - strand at 4835.612 kb on + strand at 4835.612 kb on + strand at 4835.613 kb on - strand at 4835.625 kb on + strand at 4835.637 kb on - strand at 4835.752 kb on - strand, within Psyr_4053 at 4835.752 kb on - strand, within Psyr_4053 at 4835.752 kb on - strand, within Psyr_4053 at 4835.752 kb on - strand, within Psyr_4053 at 4835.752 kb on - strand, within Psyr_4053 at 4835.752 kb on - strand, within Psyr_4053 at 4835.754 kb on + strand, within Psyr_4053 at 4835.754 kb on + strand, within Psyr_4053 at 4835.754 kb on + strand, within Psyr_4053 at 4835.754 kb on + strand, within Psyr_4053 at 4835.754 kb on + strand, within Psyr_4053 at 4835.755 kb on - strand, within Psyr_4053 at 4835.755 kb on - strand, within Psyr_4053 at 4835.755 kb on - strand, within Psyr_4053 at 4835.861 kb on - strand, within Psyr_4053 at 4835.955 kb on + strand, within Psyr_4053 at 4836.043 kb on + strand, within Psyr_4053 at 4836.043 kb on + strand, within Psyr_4053 at 4836.044 kb on - strand, within Psyr_4053 at 4836.044 kb on - strand, within Psyr_4053 at 4836.159 kb on + strand, within Psyr_4053 at 4836.159 kb on + strand, within Psyr_4053 at 4836.160 kb on - strand, within Psyr_4053 at 4836.292 kb on + strand, within Psyr_4053 at 4836.292 kb on + strand, within Psyr_4053 at 4836.292 kb on + strand, within Psyr_4053 at 4836.292 kb on + strand, within Psyr_4053 at 4836.293 kb on - strand, within Psyr_4053 at 4836.293 kb on - strand, within Psyr_4053 at 4836.293 kb on - strand, within Psyr_4053 at 4836.293 kb on - strand, within Psyr_4053 at 4836.293 kb on - strand, within Psyr_4053 at 4836.293 kb on - strand, within Psyr_4053 at 4836.293 kb on - strand, within Psyr_4053 at 4836.293 kb on - strand, within Psyr_4053 at 4836.293 kb on - strand, within Psyr_4053 at 4836.363 kb on + strand, within Psyr_4053 at 4836.364 kb on - strand, within Psyr_4053 at 4836.364 kb on - strand, within Psyr_4053 at 4836.364 kb on - strand, within Psyr_4053 at 4836.364 kb on - strand, within Psyr_4053 at 4836.364 kb on - strand, within Psyr_4053 at 4836.471 kb on + strand, within Psyr_4053 at 4836.471 kb on + strand, within Psyr_4053 at 4836.472 kb on - strand, within Psyr_4053 at 4836.472 kb on - strand, within Psyr_4053 at 4836.472 kb on - strand, within Psyr_4053 at 4836.472 kb on - strand, within Psyr_4053 at 4836.473 kb on + strand, within Psyr_4053 at 4836.474 kb on - strand, within Psyr_4053 at 4836.558 kb on + strand, within Psyr_4053 at 4836.558 kb on + strand, within Psyr_4053 at 4836.558 kb on + strand, within Psyr_4053 at 4836.558 kb on + strand, within Psyr_4053 at 4836.559 kb on - strand, within Psyr_4053 at 4836.559 kb on - strand, within Psyr_4053 at 4836.559 kb on - strand, within Psyr_4053 at 4836.559 kb on - strand, within Psyr_4053 at 4836.559 kb on - strand, within Psyr_4053 at 4836.559 kb on - strand, within Psyr_4053 at 4836.633 kb on + strand at 4836.655 kb on - strand at 4836.655 kb on - strand at 4836.655 kb on - strand at 4836.675 kb on + strand at 4836.675 kb on + strand at 4836.676 kb on - strand at 4836.728 kb on + strand at 4836.740 kb on - strand at 4836.740 kb on - strand at 4836.740 kb on - strand at 4836.777 kb on + strand at 4836.777 kb on + strand at 4836.777 kb on + strand at 4836.777 kb on + strand at 4836.778 kb on - strand at 4836.778 kb on - strand at 4836.781 kb on + strand at 4836.781 kb on + strand at 4836.781 kb on + strand at 4836.781 kb on + strand at 4836.781 kb on + strand at 4836.781 kb on + strand at 4836.781 kb on + strand at 4836.782 kb on - strand at 4836.782 kb on - strand at 4836.782 kb on - strand at 4836.782 kb on - strand at 4836.782 kb on - strand at 4836.782 kb on - strand at 4836.782 kb on - strand at 4836.782 kb on - strand at 4836.782 kb on - strand at 4836.782 kb on - strand at 4836.784 kb on + strand at 4836.784 kb on + strand at 4836.784 kb on + strand at 4836.784 kb on + strand at 4836.784 kb on + strand at 4836.784 kb on + strand at 4836.784 kb on + strand at 4836.784 kb on + strand at 4836.784 kb on + strand at 4836.784 kb on + strand at 4836.784 kb on + strand at 4836.785 kb on - strand at 4836.785 kb on - strand at 4836.785 kb on - strand at 4836.785 kb on - strand at 4836.785 kb on - strand at 4836.785 kb on - strand at 4836.785 kb on - strand at 4836.785 kb on - strand at 4836.785 kb on - strand at 4836.912 kb on + strand, within Psyr_4054 at 4836.912 kb on + strand, within Psyr_4054 at 4836.912 kb on + strand, within Psyr_4054 at 4836.913 kb on - strand, within Psyr_4054 at 4836.913 kb on - strand, within Psyr_4054 at 4837.099 kb on + strand, within Psyr_4054 at 4837.099 kb on + strand, within Psyr_4054 at 4837.100 kb on - strand, within Psyr_4054 at 4837.100 kb on - strand, within Psyr_4054 at 4837.100 kb on - strand, within Psyr_4054 at 4837.100 kb on - strand, within Psyr_4054 at 4837.165 kb on - strand, within Psyr_4054 at 4837.390 kb on + strand, within Psyr_4054 at 4837.390 kb on + strand, within Psyr_4054 at 4837.390 kb on + strand, within Psyr_4054 at 4837.483 kb on - strand at 4837.528 kb on + strand at 4837.528 kb on + strand at 4837.574 kb on + strand at 4837.574 kb on + strand at 4837.574 kb on + strand at 4837.574 kb on + strand at 4837.575 kb on - strand at 4837.575 kb on - strand at 4837.575 kb on - strand at 4837.575 kb on - strand at 4837.575 kb on - strand at 4837.575 kb on - strand at 4837.576 kb on + strand at 4837.576 kb on + strand at 4837.576 kb on + strand at 4837.576 kb on + strand at 4837.576 kb on + strand at 4837.576 kb on + strand at 4837.576 kb on + strand at 4837.576 kb on + strand at 4837.576 kb on + strand at 4837.576 kb on + strand at 4837.576 kb on + strand at 4837.576 kb on + strand at 4837.576 kb on + strand at 4837.576 kb on + strand at 4837.576 kb on + strand at 4837.576 kb on + strand at 4837.576 kb on + strand at 4837.576 kb on + strand at 4837.576 kb on + strand at 4837.576 kb on + strand at 4837.576 kb on + strand at 4837.576 kb on + strand at 4837.576 kb on + strand at 4837.576 kb on + strand at 4837.576 kb on + strand at 4837.576 kb on + strand at 4837.577 kb on - strand at 4837.577 kb on - strand at 4837.577 kb on - strand at 4837.577 kb on - strand at 4837.577 kb on - strand at 4837.577 kb on - strand at 4837.577 kb on - strand at 4837.577 kb on - strand at 4837.577 kb on - strand at 4837.577 kb on - strand at 4837.577 kb on - strand at 4837.577 kb on - strand at 4837.577 kb on - strand at 4837.577 kb on - strand at 4837.577 kb on - strand at 4837.577 kb on - strand at 4837.577 kb on - strand at 4837.577 kb on - strand at 4837.577 kb on - strand at 4837.577 kb on - strand at 4837.577 kb on - strand at 4837.577 kb on - strand at 4837.577 kb on - strand at 4837.577 kb on - strand at 4837.577 kb on - strand at 4837.577 kb on - strand at 4837.577 kb on - strand at 4837.580 kb on + strand at 4837.580 kb on + strand at 4837.580 kb on + strand at 4837.580 kb on + strand at 4837.580 kb on + strand at 4837.580 kb on + strand at 4837.580 kb on + strand at 4837.581 kb on - strand at 4837.581 kb on - strand at 4837.581 kb on - strand at 4837.581 kb on - strand at 4837.581 kb on - strand at 4837.581 kb on - strand at 4837.581 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Rotenone 0.125 mg/ml remove 4,834,710 + Psyr_4052 0.23 +0.9 4,834,710 + Psyr_4052 0.23 +0.6 4,834,711 - Psyr_4052 0.23 +0.4 4,834,711 - Psyr_4052 0.23 -0.5 4,834,861 + Psyr_4052 0.36 +0.0 4,834,862 - Psyr_4052 0.36 -0.5 4,835,100 + Psyr_4052 0.57 -0.8 4,835,100 + Psyr_4052 0.57 -0.6 4,835,100 + Psyr_4052 0.57 +0.1 4,835,100 + Psyr_4052 0.57 -0.8 4,835,100 + Psyr_4052 0.57 -0.1 4,835,100 + Psyr_4052 0.57 -0.6 4,835,100 + Psyr_4052 0.57 +0.2 4,835,100 + Psyr_4052 0.57 +0.6 4,835,100 + Psyr_4052 0.57 -0.8 4,835,100 + Psyr_4052 0.57 +1.0 4,835,100 + Psyr_4052 0.57 -0.4 4,835,100 + Psyr_4052 0.57 -0.3 4,835,100 + Psyr_4052 0.57 +1.4 4,835,100 + Psyr_4052 0.57 -0.3 4,835,101 - Psyr_4052 0.57 -0.1 4,835,101 - Psyr_4052 0.57 -0.8 4,835,101 - Psyr_4052 0.57 -0.7 4,835,101 - Psyr_4052 0.57 -0.6 4,835,101 - Psyr_4052 0.57 +1.2 4,835,101 - Psyr_4052 0.57 -1.3 4,835,101 - Psyr_4052 0.57 +1.4 4,835,101 - Psyr_4052 0.57 -0.8 4,835,101 - Psyr_4052 0.57 +0.7 4,835,101 - Psyr_4052 0.57 +0.2 4,835,135 - Psyr_4052 0.60 -0.1 4,835,135 - Psyr_4052 0.60 +0.3 4,835,278 + Psyr_4052 0.72 -0.8 4,835,558 + -0.2 4,835,559 - -0.6 4,835,598 - -0.7 4,835,612 + -0.5 4,835,612 + +1.7 4,835,613 - +2.3 4,835,625 + -1.1 4,835,637 - -0.5 4,835,752 - Psyr_4053 0.12 -0.5 4,835,752 - Psyr_4053 0.12 -0.5 4,835,752 - Psyr_4053 0.12 -0.6 4,835,752 - Psyr_4053 0.12 +1.5 4,835,752 - Psyr_4053 0.12 +2.3 4,835,752 - Psyr_4053 0.12 +0.6 4,835,754 + Psyr_4053 0.12 +1.7 4,835,754 + Psyr_4053 0.12 +0.5 4,835,754 + Psyr_4053 0.12 -0.8 4,835,754 + Psyr_4053 0.12 +1.0 4,835,754 + Psyr_4053 0.12 +0.2 4,835,755 - Psyr_4053 0.12 -1.6 4,835,755 - Psyr_4053 0.12 -0.3 4,835,755 - Psyr_4053 0.12 -1.6 4,835,861 - Psyr_4053 0.22 +1.5 4,835,955 + Psyr_4053 0.31 +0.5 4,836,043 + Psyr_4053 0.40 +0.1 4,836,043 + Psyr_4053 0.40 +1.3 4,836,044 - Psyr_4053 0.40 +2.7 4,836,044 - Psyr_4053 0.40 +0.4 4,836,159 + Psyr_4053 0.51 +1.1 4,836,159 + Psyr_4053 0.51 -0.3 4,836,160 - Psyr_4053 0.51 +1.2 4,836,292 + Psyr_4053 0.63 +0.3 4,836,292 + Psyr_4053 0.63 -0.8 4,836,292 + Psyr_4053 0.63 -0.2 4,836,292 + Psyr_4053 0.63 -0.1 4,836,293 - Psyr_4053 0.63 +0.7 4,836,293 - Psyr_4053 0.63 -1.2 4,836,293 - Psyr_4053 0.63 +1.2 4,836,293 - Psyr_4053 0.63 +0.5 4,836,293 - Psyr_4053 0.63 -0.1 4,836,293 - Psyr_4053 0.63 +0.6 4,836,293 - Psyr_4053 0.63 -0.3 4,836,293 - Psyr_4053 0.63 +1.7 4,836,293 - Psyr_4053 0.63 -0.6 4,836,363 + Psyr_4053 0.70 -0.0 4,836,364 - Psyr_4053 0.70 +2.5 4,836,364 - Psyr_4053 0.70 +0.2 4,836,364 - Psyr_4053 0.70 -0.1 4,836,364 - Psyr_4053 0.70 -0.0 4,836,364 - Psyr_4053 0.70 +0.1 4,836,471 + Psyr_4053 0.80 +1.2 4,836,471 + Psyr_4053 0.80 +0.9 4,836,472 - Psyr_4053 0.80 +0.4 4,836,472 - Psyr_4053 0.80 -0.4 4,836,472 - Psyr_4053 0.80 -0.2 4,836,472 - Psyr_4053 0.80 -0.7 4,836,473 + Psyr_4053 0.80 +0.6 4,836,474 - Psyr_4053 0.81 +1.0 4,836,558 + Psyr_4053 0.89 +1.1 4,836,558 + Psyr_4053 0.89 -0.4 4,836,558 + Psyr_4053 0.89 -0.3 4,836,558 + Psyr_4053 0.89 -0.7 4,836,559 - Psyr_4053 0.89 +1.2 4,836,559 - Psyr_4053 0.89 +0.2 4,836,559 - Psyr_4053 0.89 -0.5 4,836,559 - Psyr_4053 0.89 +1.0 4,836,559 - Psyr_4053 0.89 +1.0 4,836,559 - Psyr_4053 0.89 +1.7 4,836,633 + -0.8 4,836,655 - +0.6 4,836,655 - -2.3 4,836,655 - +0.2 4,836,675 + +0.2 4,836,675 + -0.1 4,836,676 - -1.1 4,836,728 + +1.1 4,836,740 - +0.3 4,836,740 - +0.5 4,836,740 - +0.5 4,836,777 + +1.3 4,836,777 + +0.1 4,836,777 + +0.7 4,836,777 + +0.1 4,836,778 - -1.2 4,836,778 - +0.5 4,836,781 + +0.7 4,836,781 + +1.3 4,836,781 + +0.3 4,836,781 + -0.1 4,836,781 + +0.3 4,836,781 + +1.2 4,836,781 + -0.3 4,836,782 - +2.2 4,836,782 - +1.5 4,836,782 - -3.2 4,836,782 - +0.6 4,836,782 - +0.2 4,836,782 - +0.0 4,836,782 - -0.5 4,836,782 - +1.0 4,836,782 - -0.5 4,836,782 - -0.2 4,836,784 + +2.2 4,836,784 + +1.7 4,836,784 + -0.8 4,836,784 + +0.7 4,836,784 + +0.2 4,836,784 + +0.3 4,836,784 + -0.6 4,836,784 + -0.6 4,836,784 + +0.2 4,836,784 + -1.8 4,836,784 + +0.9 4,836,785 - -0.7 4,836,785 - +0.6 4,836,785 - -0.8 4,836,785 - +1.3 4,836,785 - -0.3 4,836,785 - +0.5 4,836,785 - +0.0 4,836,785 - -0.2 4,836,785 - +1.3 4,836,912 + Psyr_4054 0.21 -0.3 4,836,912 + Psyr_4054 0.21 +0.2 4,836,912 + Psyr_4054 0.21 +0.3 4,836,913 - Psyr_4054 0.21 -0.7 4,836,913 - Psyr_4054 0.21 -0.4 4,837,099 + Psyr_4054 0.46 -0.9 4,837,099 + Psyr_4054 0.46 -0.3 4,837,100 - Psyr_4054 0.46 +0.4 4,837,100 - Psyr_4054 0.46 -0.2 4,837,100 - Psyr_4054 0.46 +0.2 4,837,100 - Psyr_4054 0.46 +0.5 4,837,165 - Psyr_4054 0.54 +0.6 4,837,390 + Psyr_4054 0.84 +1.7 4,837,390 + Psyr_4054 0.84 +1.2 4,837,390 + Psyr_4054 0.84 -0.0 4,837,483 - -1.8 4,837,528 + -0.5 4,837,528 + -0.1 4,837,574 + -1.5 4,837,574 + +0.7 4,837,574 + -2.1 4,837,574 + -1.1 4,837,575 - +0.4 4,837,575 - +3.6 4,837,575 - +0.2 4,837,575 - -1.6 4,837,575 - +0.1 4,837,575 - -0.5 4,837,576 + +0.5 4,837,576 + +0.1 4,837,576 + -1.1 4,837,576 + +0.9 4,837,576 + -0.7 4,837,576 + +0.7 4,837,576 + +2.3 4,837,576 + +0.8 4,837,576 + +0.1 4,837,576 + -0.2 4,837,576 + +0.3 4,837,576 + -1.5 4,837,576 + -1.0 4,837,576 + -0.4 4,837,576 + +1.0 4,837,576 + +1.2 4,837,576 + +0.2 4,837,576 + +0.2 4,837,576 + -0.1 4,837,576 + -0.5 4,837,576 + +0.1 4,837,576 + +0.2 4,837,576 + +1.5 4,837,576 + -1.1 4,837,576 + -0.8 4,837,576 + +0.4 4,837,577 - +2.1 4,837,577 - -0.6 4,837,577 - +0.5 4,837,577 - +1.2 4,837,577 - +0.3 4,837,577 - +1.2 4,837,577 - -0.8 4,837,577 - -0.3 4,837,577 - +0.2 4,837,577 - +0.9 4,837,577 - +0.9 4,837,577 - +1.3 4,837,577 - -0.2 4,837,577 - +0.9 4,837,577 - -0.5 4,837,577 - +0.6 4,837,577 - +1.2 4,837,577 - -1.3 4,837,577 - -0.6 4,837,577 - +0.7 4,837,577 - -0.7 4,837,577 - +1.0 4,837,577 - -1.4 4,837,577 - +0.6 4,837,577 - +0.5 4,837,577 - +0.3 4,837,577 - -0.0 4,837,580 + -1.1 4,837,580 + -0.3 4,837,580 + +0.5 4,837,580 + -0.6 4,837,580 + +1.1 4,837,580 + +1.2 4,837,580 + +0.7 4,837,581 - +0.7 4,837,581 - +0.6 4,837,581 - +0.3 4,837,581 - -1.0 4,837,581 - -3.7 4,837,581 - -0.1 4,837,581 - +0.9
Or see this region's nucleotide sequence