Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3195

Experiment: KB with Rotenone 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rotenone 0.125 mg/ml
3,824,042	-				+0.4
3,824,042	-				-0.8
3,824,042	-				-0.6
3,824,052	+				+2.4
3,824,052	+				+0.2
3,824,053	-				+0.9
3,824,053	-				+0.7
3,824,053	-				+0.5
3,824,053	-				-0.2
3,824,053	-				+1.0
3,824,186	+		Psyr_3194	0.35	+0.7
3,824,375	+		Psyr_3194	0.80	-1.9
3,824,440	+				+0.2
3,824,493	-				-1.0
3,824,493	-				+2.2
3,824,496	+				-0.1
3,824,496	+				+0.7
3,824,497	-				-1.6
3,824,497	-				+1.4
3,824,653	-				-0.1
3,824,741	+		Psyr_3195	0.13	+0.6
3,825,080	+		Psyr_3195	0.58	-1.5
3,825,080	+		Psyr_3195	0.58	+2.6
3,825,081	-		Psyr_3195	0.59	-0.1
3,825,081	-		Psyr_3195	0.59	+1.2
3,825,117	+		Psyr_3195	0.63	-1.0
3,825,118	-		Psyr_3195	0.64	+2.7
3,825,131	+		Psyr_3195	0.65	+0.6
3,825,131	+		Psyr_3195	0.65	+0.1
3,825,131	+		Psyr_3195	0.65	+0.8
3,825,131	+		Psyr_3195	0.65	+1.5
3,825,132	-		Psyr_3195	0.65	+1.4
3,825,366	+				+1.4
3,825,412	-				+0.2
3,825,412	-				+1.4
3,825,455	+				-1.6
3,825,455	+				+1.4
3,825,455	+				+1.7
3,825,456	-				-0.6
3,825,459	+				-0.4
3,825,460	-				-0.3
3,825,460	-				-3.4
3,825,667	+				+0.4
3,825,796	-				-0.6
3,825,840	+				-0.0
3,825,840	+				+0.3
3,825,841	-				+0.8
3,825,841	-				-0.3
3,825,841	-				-0.4
3,825,896	+				+1.0
3,825,896	+				+0.1
3,825,896	+				-0.3
3,825,896	+				+1.2
3,825,897	-				-0.5
3,825,897	-				+0.3
3,825,903	-				+1.0
3,825,903	-				+1.2
3,825,911	-				-1.3
3,825,943	-				-0.7
3,826,001	+				-0.5
3,826,001	+				+1.0
3,826,002	-				+0.4
3,826,002	-				+0.4
3,826,002	-				+3.0
3,826,205	+		Psyr_3196	0.22	-0.3
3,826,205	+		Psyr_3196	0.22	-0.7
3,826,205	+		Psyr_3196	0.22	+1.0
3,826,206	-		Psyr_3196	0.22	+0.4
3,826,206	-		Psyr_3196	0.22	+1.6
3,826,206	-				+0.6
3,826,206	-		Psyr_3196	0.22	-0.0
3,826,206	-		Psyr_3196	0.22	+1.7
3,826,206	-		Psyr_3196	0.22	+0.5
3,826,206	-		Psyr_3196	0.22	-0.1
3,826,379	+		Psyr_3196	0.35	+1.9
3,826,379	+		Psyr_3196	0.35	+1.0
3,826,379	+		Psyr_3196	0.35	+1.0
3,826,380	-		Psyr_3196	0.35	+0.2
3,826,380	-		Psyr_3196	0.35	+0.9
3,826,380	-		Psyr_3196	0.35	-1.0
3,826,388	+		Psyr_3196	0.36	-0.1