Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3184

Experiment: KB with Rotenone 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rotenone 0.125 mg/ml
3,812,285	-		Psyr_3183	0.67	+0.4
3,812,285	-		Psyr_3183	0.67	-0.6
3,812,507	-		Psyr_3183	0.77	+0.4
3,812,612	+		Psyr_3183	0.81	-0.6
3,812,626	+		Psyr_3183	0.82	+0.4
3,812,626	+		Psyr_3183	0.82	+1.1
3,812,626	+		Psyr_3183	0.82	+2.5
3,812,627	-		Psyr_3183	0.82	+0.1
3,812,627	-		Psyr_3183	0.82	+0.9
3,812,627	-		Psyr_3183	0.82	+2.1
3,812,627	-		Psyr_3183	0.82	-0.2
3,812,627	-		Psyr_3183	0.82	+0.2
3,812,935	-				-2.4
3,813,030	+				+1.9
3,813,035	+				-0.0
3,813,035	+				-0.1
3,813,035	+				-0.6
3,813,035	+				-1.2
3,813,035	+				-1.2
3,813,035	+				-0.2
3,813,035	+				+0.1
3,813,035	+				-0.2
3,813,035	+				+1.4
3,813,035	+				+1.2
3,813,036	-				+3.4
3,813,036	-				-1.4
3,813,036	-				+2.1
3,813,036	-				-1.4
3,813,036	-				-0.6
3,813,036	-				+1.1
3,813,036	-				-0.0
3,813,036	-				-0.8
3,813,036	-				-0.6
3,813,036	-				+3.0
3,813,259	-		Psyr_3184	0.53	-0.8
3,813,307	+		Psyr_3184	0.66	+1.2
3,813,307	+		Psyr_3184	0.66	-1.9
3,813,307	+		Psyr_3184	0.66	-0.6
3,813,307	+		Psyr_3184	0.66	-1.4
3,813,307	+		Psyr_3184	0.66	-0.9
3,813,308	-		Psyr_3184	0.67	-0.8
3,813,308	-		Psyr_3184	0.67	+0.4
3,813,467	-				+2.2
3,813,618	+				+0.4
3,813,618	+				-0.0
3,813,619	-				+0.4
3,813,960	+				-0.2
3,813,960	+				+2.4
3,813,960	+				+1.0
3,813,960	+				+1.0
3,813,960	+				-0.0
3,813,960	+				-0.2
3,813,960	+				-0.0
3,813,960	+				-2.6
3,813,960	+				+0.8
3,813,961	-				-0.1
3,813,961	-				-1.3
3,813,961	-				-0.7
3,813,961	-				+0.4
3,813,961	-				-1.0
3,813,961	-				-0.3
3,813,961	-				+1.1
3,814,024	+				+1.2
3,814,025	-				-0.1
3,814,025	-				-0.1
3,814,051	+				+1.6
3,814,051	+				-0.6
3,814,051	+				-0.1
3,814,052	-				-1.9
3,814,054	-				+0.5
3,814,079	+				-0.2
3,814,079	+				-0.1
3,814,080	-				+0.2
3,814,080	-				-2.0
3,814,080	-				-0.6
3,814,289	+				+0.4
3,814,321	+				+2.0
3,814,321	+				+1.0