Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2638

Experiment: KB with Rotenone 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rotenone 0.125 mg/ml
3,204,448	+		Psyr_2637	0.51	-0.2
3,204,488	+		Psyr_2637	0.54	+0.8
3,204,489	-		Psyr_2637	0.54	-0.8
3,204,535	-		Psyr_2637	0.57	+0.1
3,204,575	-		Psyr_2637	0.60	+2.1
3,204,636	+		Psyr_2637	0.65	+0.1
3,204,637	-		Psyr_2637	0.65	+0.3
3,204,811	+		Psyr_2637	0.78	-0.9
3,204,812	-		Psyr_2637	0.78	-0.1
3,204,849	+		Psyr_2637	0.81	+1.1
3,204,849	+		Psyr_2637	0.81	-2.8
3,204,850	-		Psyr_2637	0.81	-0.2
3,204,975	+				-1.8
3,204,999	+				-0.5
3,205,048	+				+0.8
3,205,048	+				+1.5
3,205,049	-				-0.5
3,205,151	-				-0.5
3,205,197	-				+0.8
3,205,198	+				+1.8
3,205,198	+				-0.2
3,205,198	+				+0.5
3,205,199	-				-1.1
3,205,199	-				+0.2
3,205,199	-				-0.2
3,205,253	+				-0.3
3,205,254	-				+0.2
3,205,257	+		Psyr_2638	0.10	-0.2
3,205,257	+		Psyr_2638	0.10	-0.1
3,205,257	+		Psyr_2638	0.10	+0.9
3,205,257	+		Psyr_2638	0.10	+0.5
3,205,257	+		Psyr_2638	0.10	+0.7
3,205,257	+		Psyr_2638	0.10	+0.8
3,205,257	+		Psyr_2638	0.10	+1.2
3,205,258	-		Psyr_2638	0.10	-1.1
3,205,258	-		Psyr_2638	0.10	+0.7
3,205,258	-		Psyr_2638	0.10	+1.3
3,205,258	-		Psyr_2638	0.10	+1.5
3,205,258	-		Psyr_2638	0.10	-1.0
3,205,258	-		Psyr_2638	0.10	-0.6
3,205,261	-		Psyr_2638	0.10	+0.2
3,205,414	+		Psyr_2638	0.25	+0.1
3,205,414	+		Psyr_2638	0.25	+0.6
3,205,415	-		Psyr_2638	0.25	+0.3
3,205,507	+		Psyr_2638	0.33	-0.2
3,205,582	+		Psyr_2638	0.40	-0.8
3,205,582	+		Psyr_2638	0.40	-1.2
3,205,583	-		Psyr_2638	0.41	+1.0
3,205,583	-		Psyr_2638	0.41	+0.2
3,205,583	-		Psyr_2638	0.41	+2.8
3,205,831	+		Psyr_2638	0.64	+0.6
3,205,831	+		Psyr_2638	0.64	+0.7
3,205,831	+		Psyr_2638	0.64	-0.1
3,205,832	-		Psyr_2638	0.64	-0.8
3,205,832	-		Psyr_2638	0.64	+0.7
3,205,832	-		Psyr_2638	0.64	+1.9
3,205,832	-		Psyr_2638	0.64	+1.9
3,205,832	-		Psyr_2638	0.64	+0.2
3,205,832	-		Psyr_2638	0.64	-0.9
3,205,915	+		Psyr_2638	0.72	+0.8
3,205,915	+		Psyr_2638	0.72	+0.7
3,205,915	+		Psyr_2638	0.72	-1.2
3,205,915	+		Psyr_2638	0.72	+0.1
3,205,915	+		Psyr_2638	0.72	+1.2
3,205,915	+		Psyr_2638	0.72	+1.7
3,205,915	+		Psyr_2638	0.72	-1.5
3,205,915	+		Psyr_2638	0.72	-0.1
3,205,916	-		Psyr_2638	0.72	-0.2
3,205,916	-		Psyr_2638	0.72	+0.8
3,205,916	-		Psyr_2638	0.72	-1.1
3,205,916	-		Psyr_2638	0.72	+1.3
3,205,916	-		Psyr_2638	0.72	-0.1
3,205,916	-		Psyr_2638	0.72	-0.7
3,205,918	+		Psyr_2638	0.72	-1.3
3,205,918	+		Psyr_2638	0.72	-0.0
3,205,919	-		Psyr_2638	0.72	-1.0
3,205,919	-		Psyr_2638	0.72	-0.4
3,205,919	-		Psyr_2638	0.72	+1.6
3,205,919	-		Psyr_2638	0.72	+0.4
3,205,919	-		Psyr_2638	0.72	-0.1
3,205,999	+		Psyr_2638	0.79	+2.0
3,206,000	-		Psyr_2638	0.79	-0.3
3,206,053	+		Psyr_2638	0.84	+0.2
3,206,053	+		Psyr_2638	0.84	-0.8
3,206,053	+		Psyr_2638	0.84	-0.7
3,206,053	+		Psyr_2638	0.84	+0.1
3,206,053	+		Psyr_2638	0.84	-1.8
3,206,053	+		Psyr_2638	0.84	+1.1
3,206,053	+		Psyr_2638	0.84	+0.5
3,206,053	+		Psyr_2638	0.84	+1.7
3,206,053	+		Psyr_2638	0.84	-1.0
3,206,053	+		Psyr_2638	0.84	+2.7
3,206,054	-		Psyr_2638	0.85	-0.2
3,206,054	-		Psyr_2638	0.85	+1.8
3,206,054	-		Psyr_2638	0.85	-0.5
3,206,054	-		Psyr_2638	0.85	-0.7
3,206,054	-		Psyr_2638	0.85	-0.0
3,206,166	+				+0.6
3,206,213	+				-0.3
3,206,213	+				+1.2
3,206,213	+				-0.3
3,206,214	-				+0.3
3,206,214	-				-0.2
3,206,214	-				+0.0
3,206,214	-				-0.4
3,206,223	+				-0.0
3,206,223	+				+0.7
3,206,223	+				-0.3
3,206,223	+				+0.2
3,206,224	-				-0.2
3,206,231	-				-0.8
3,206,233	+				+0.9
3,206,244	+				+0.9
3,206,244	+				+0.8
3,206,245	-				+0.4
3,206,367	+				-0.3
3,206,368	-				-0.1
3,206,421	-				-1.1
3,206,457	+				+1.0
3,206,463	+				+0.2
3,206,604	+				+1.1
3,206,604	+				+0.3
3,206,605	-				-0.8
3,206,631	+				+0.5
3,206,631	+				-3.9
3,206,660	-				-1.7
3,206,690	+				+0.0
3,206,690	+				+0.3
3,206,691	-				+2.5
3,206,691	-				+1.1
3,206,696	+				-0.2
3,206,696	+				+0.7
3,206,696	+				-0.3
3,206,696	+				+1.5
3,206,697	-				-0.2
3,206,697	-				-0.3
3,206,773	-		Psyr_2639	0.15	+0.5
3,206,838	+		Psyr_2639	0.29	-0.5
3,206,839	-		Psyr_2639	0.30	-0.2
3,206,839	-		Psyr_2639	0.30	-0.3
3,206,842	+		Psyr_2639	0.30	-1.3
3,206,842	+		Psyr_2639	0.30	+1.8
3,206,843	-		Psyr_2639	0.31	-0.4
3,206,961	+		Psyr_2639	0.56	+0.3
3,206,962	-		Psyr_2639	0.56	-0.0
3,206,962	-		Psyr_2639	0.56	-1.4
3,206,962	-		Psyr_2639	0.56	-3.7
3,206,981	+		Psyr_2639	0.60	+1.0
3,207,065	+		Psyr_2639	0.78	-0.5
3,207,065	+		Psyr_2639	0.78	-0.9
3,207,065	+		Psyr_2639	0.78	-1.4
3,207,065	+		Psyr_2639	0.78	+0.8
3,207,065	+		Psyr_2639	0.78	-0.6
3,207,066	-		Psyr_2639	0.78	-0.5
3,207,066	-		Psyr_2639	0.78	-0.8
3,207,066	-		Psyr_2639	0.78	-0.6
3,207,066	-		Psyr_2639	0.78	-0.7
3,207,066	-		Psyr_2639	0.78	+0.8
3,207,066	-		Psyr_2639	0.78	+1.7
3,207,066	-		Psyr_2639	0.78	+1.8
3,207,066	-		Psyr_2639	0.78	+0.0
3,207,066	-		Psyr_2639	0.78	-0.0
3,207,066	-		Psyr_2639	0.78	-0.2
3,207,066	-		Psyr_2639	0.78	-0.0
3,207,066	-		Psyr_2639	0.78	+1.1
3,207,066	-		Psyr_2639	0.78	-0.2
3,207,082	+		Psyr_2639	0.82	+0.0
3,207,083	-		Psyr_2639	0.82	-0.4
3,207,162	-				+0.4
3,207,162	-				+0.8