Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2213

Experiment: KB with Rotenone 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rotenone 0.125 mg/ml
2,570,879	+		Psyr_2212	0.17	+2.1
2,571,133	+		Psyr_2212	0.46	-1.6
2,571,133	+		Psyr_2212	0.46	-0.2
2,571,133	+		Psyr_2212	0.46	+0.5
2,571,133	+		Psyr_2212	0.46	-0.5
2,571,133	+		Psyr_2212	0.46	-0.1
2,571,133	+		Psyr_2212	0.46	-0.5
2,571,134	-		Psyr_2212	0.46	+0.8
2,571,134	-		Psyr_2212	0.46	-0.2
2,571,134	-		Psyr_2212	0.46	-0.2
2,571,134	-		Psyr_2212	0.46	-0.5
2,571,134	-		Psyr_2212	0.46	-0.0
2,571,134	-		Psyr_2212	0.46	-0.7
2,571,134	-		Psyr_2212	0.46	-0.2
2,571,134	-		Psyr_2212	0.46	-0.2
2,571,134	-		Psyr_2212	0.46	-0.7
2,571,134	-		Psyr_2212	0.46	-0.2
2,571,313	+		Psyr_2212	0.66	-0.1
2,571,753	+				+0.7
2,572,130	+		Psyr_2213	0.41	-2.6
2,572,130	+		Psyr_2213	0.41	-3.0
2,572,130	+		Psyr_2213	0.41	-0.5
2,572,130	+		Psyr_2213	0.41	-0.7
2,572,525	+		Psyr_2213	0.83	+0.0
2,572,526	-		Psyr_2213	0.83	-0.5
2,572,526	-		Psyr_2213	0.83	-0.3
2,572,602	+				-0.1
2,572,603	-				-0.3
2,572,765	+				+1.6
2,572,766	-				-0.1
2,572,796	+				+0.2
2,572,797	-				+1.3
2,572,797	-				-0.2
2,572,818	+				+0.7
2,572,824	+				+0.3
2,572,824	+				-0.3
2,572,828	+				-1.6
2,572,828	+				+0.3
2,572,828	+				+1.0
2,572,828	+				+1.2
2,572,828	+				-0.3
2,572,829	-				+0.1
2,572,829	-				-0.8
2,572,829	-				+0.7
2,572,829	-				-0.1
2,572,950	+				+0.5
2,572,950	+				-0.3
2,572,951	-				+0.4
2,572,953	+				+0.5
2,572,996	+				-0.5
2,572,997	-				-1.7
2,573,096	-				-0.0
2,573,096	-				+0.1
2,573,101	+				+0.5
2,573,102	-				-1.9
2,573,108	-				-1.1
2,573,108	-				-0.6
2,573,108	-				-0.8
2,573,213	+				-1.1
2,573,261	+				-0.5
2,573,261	+				+3.6
2,573,262	-				-0.3
2,573,269	+				+2.5
2,573,270	-				-1.1
2,573,270	-				-0.0
2,573,270	-				+0.2
2,573,270	-				+0.8
2,573,277	+				+0.6
2,573,277	+				-0.3
2,573,278	-				-0.9
2,573,285	+				+0.2
2,573,286	-				-1.0
2,573,286	-				+1.6
2,573,537	-		Psyr_2214	0.11	+0.3
2,573,588	-		Psyr_2214	0.13	-1.1
2,573,635	+		Psyr_2214	0.15	+0.3
2,573,635	+		Psyr_2214	0.15	+0.1
2,573,635	+		Psyr_2214	0.15	+0.7
2,573,636	-		Psyr_2214	0.16	-1.5
2,573,637	+		Psyr_2214	0.16	-1.7
2,573,637	+		Psyr_2214	0.16	+0.3