Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2201

Experiment: KB with Rotenone 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rotenone 0.125 mg/ml
2,557,801	+		Psyr_2200	0.30	-0.8
2,557,849	+		Psyr_2200	0.41	+3.5
2,557,850	-		Psyr_2200	0.41	-0.3
2,558,474	+		Psyr_2201	0.50	-1.5
2,558,486	+		Psyr_2201	0.51	+0.4
2,558,486	+		Psyr_2201	0.51	-1.2
2,558,487	-		Psyr_2201	0.52	-2.5
2,558,609	+		Psyr_2201	0.69	+0.1
2,558,792	+				+1.3
2,558,792	+				-0.1
2,558,792	+				+0.2
2,558,792	+				+0.2
2,558,793	-				-0.9
2,558,885	-				+3.9
2,559,481	+		Psyr_2202	0.89	+1.4
2,559,481	+		Psyr_2202	0.89	+0.1
2,559,481	+		Psyr_2202	0.89	+0.1
2,559,481	+		Psyr_2202	0.89	+0.9
2,559,482	-		Psyr_2202	0.89	+0.3
2,559,482	-		Psyr_2202	0.89	-0.7
2,559,654	+				-2.6
2,559,655	-				-0.2
2,559,655	-				-1.4
2,559,762	+		Psyr_2203	0.18	+2.5
2,559,763	-		Psyr_2203	0.18	-0.7