Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1983

Experiment: KB with Rotenone 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rotenone 0.125 mg/ml
2,301,782	+				-1.1
2,301,783	-				+0.7
2,301,783	-				-0.0
2,301,787	+				-1.3
2,301,788	-				+0.5
2,301,788	-				-0.9
2,301,788	-				+1.6
2,301,805	+		Psyr_1982	0.11	-1.2
2,301,906	+		Psyr_1982	0.23	-1.2
2,301,906	+		Psyr_1982	0.23	+2.6
2,301,906	+		Psyr_1982	0.23	-0.6
2,301,907	-		Psyr_1982	0.23	-0.6
2,301,908	+		Psyr_1982	0.23	-0.3
2,301,908	+		Psyr_1982	0.23	+0.4
2,301,908	+		Psyr_1982	0.23	-0.8
2,301,908	+		Psyr_1982	0.23	+2.1
2,301,908	+		Psyr_1982	0.23	-0.3
2,301,908	+		Psyr_1982	0.23	+0.5
2,301,908	+		Psyr_1982	0.23	+0.2
2,301,908	+		Psyr_1982	0.23	-0.6
2,301,908	+		Psyr_1982	0.23	+2.0
2,301,908	+		Psyr_1982	0.23	-1.1
2,301,908	+		Psyr_1982	0.23	+0.3
2,301,909	-		Psyr_1982	0.23	-0.3
2,301,909	-		Psyr_1982	0.23	-1.0
2,301,909	-		Psyr_1982	0.23	+1.0
2,301,909	-		Psyr_1982	0.23	+0.5
2,301,909	-		Psyr_1982	0.23	+2.8
2,301,909	-		Psyr_1982	0.23	+0.4
2,301,909	-		Psyr_1982	0.23	-0.3
2,301,909	-		Psyr_1982	0.23	+1.1
2,301,909	-		Psyr_1982	0.23	+0.7
2,301,909	-		Psyr_1982	0.23	+0.4
2,301,909	-		Psyr_1982	0.23	+1.1
2,301,909	-		Psyr_1982	0.23	+2.8
2,301,909	-		Psyr_1982	0.23	-1.3
2,301,909	-		Psyr_1982	0.23	+0.3
2,301,909	-		Psyr_1982	0.23	+0.1
2,301,909	-		Psyr_1982	0.23	-0.8
2,301,979	-		Psyr_1982	0.31	-0.7
2,302,021	-		Psyr_1982	0.36	-1.1
2,302,140	+		Psyr_1982	0.50	+0.5
2,302,140	+		Psyr_1982	0.50	+0.5
2,302,141	-		Psyr_1982	0.50	+0.7
2,302,252	+		Psyr_1982	0.63	+0.2
2,302,252	+		Psyr_1982	0.63	-1.1
2,302,373	+		Psyr_1982	0.76	+1.5
2,302,374	-		Psyr_1982	0.77	-2.1
2,302,638	+				+0.4
2,302,639	-				+0.4
2,302,694	+				+0.4
2,302,695	-				-0.8
2,302,695	-				-0.5
2,302,695	-				-1.4
2,302,716	+				+0.4
2,302,802	+				+0.8
2,302,802	+				-0.1
2,302,802	+				+0.9
2,302,802	+				+0.0
2,302,802	+				+0.1
2,302,802	+				+2.3
2,302,803	-				-1.1
2,302,803	-				-0.3
2,302,816	+				+0.2
2,302,816	+				+0.5
2,302,816	+				-2.1
2,302,817	-				+0.3
2,302,817	-				-0.2
2,302,817	-				-0.9
2,302,817	-				+0.1
2,303,135	-		Psyr_1983	0.29	+0.6
2,303,462	+		Psyr_1983	0.52	-0.2
2,303,462	+		Psyr_1983	0.52	+0.1
2,303,711	+		Psyr_1983	0.69	-1.6
2,303,711	+		Psyr_1983	0.69	+0.2
2,303,711	+		Psyr_1983	0.69	-2.4
2,303,711	+		Psyr_1983	0.69	-1.1
2,303,711	+		Psyr_1983	0.69	+1.7
2,303,711	+		Psyr_1983	0.69	-0.3
2,303,711	+		Psyr_1983	0.69	+0.8
2,303,712	-		Psyr_1983	0.69	-0.7
2,303,712	-		Psyr_1983	0.69	-1.3
2,303,712	-		Psyr_1983	0.69	+0.2
2,304,032	-				+0.1
2,304,463	-		Psyr_1984	0.47	+0.5
2,304,492	+		Psyr_1984	0.52	-0.2
2,304,493	-		Psyr_1984	0.52	+2.1
2,304,572	-		Psyr_1984	0.64	-0.9
2,304,572	-		Psyr_1984	0.64	-0.0
2,304,572	-				+0.5
2,304,845	+				+1.8
2,304,845	+				-1.7
2,304,846	-				+0.1
2,304,846	-				-1.3
2,304,846	-				+1.5
2,304,846	-				+1.2
2,304,955	+				+0.2
2,304,956	-				+0.2