Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1402

Experiment: KB with Rotenone 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rotenone 0.125 mg/ml
1,588,597	+				-0.2
1,588,597	+				-0.4
1,588,597	+				+1.1
1,588,597	+				-0.7
1,588,598	-				+1.4
1,588,598	-				-1.8
1,588,616	+				-0.0
1,588,616	+				+1.3
1,588,616	+				+1.0
1,588,616	+				-1.4
1,588,616	+				+0.7
1,588,617	-				+0.3
1,588,617	-				+0.2
1,588,718	+				-0.4
1,588,718	+				+1.7
1,588,718	+				-0.3
1,588,718	+				+0.0
1,588,718	+				-1.2
1,588,718	+				-0.6
1,588,718	+				-0.1
1,588,718	+				+0.2
1,588,718	+				+0.1
1,588,719	-				-0.3
1,588,719	-				-0.6
1,588,719	-				+0.6
1,588,719	-				-1.5
1,588,741	+				+1.2
1,588,750	+				+0.7
1,588,808	+				-1.5
1,588,808	+				-0.5
1,588,808	+				-0.9
1,588,809	-				+0.6
1,588,818	-				-0.2
1,588,818	-				-2.8
1,588,884	+				-2.3
1,588,884	+				-1.9
1,588,884	+				-1.8
1,588,885	-				+1.5
1,588,887	+				-0.1
1,588,958	+				+0.3
1,588,995	-				+1.2
1,589,186	+		Psyr_1401	0.52	-0.4
1,589,187	-		Psyr_1401	0.52	-0.4
1,589,231	+		Psyr_1401	0.62	-0.3
1,589,231	+		Psyr_1401	0.62	+0.7
1,589,231	+		Psyr_1401	0.62	+0.5
1,589,231	+		Psyr_1401	0.62	-1.0
1,589,231	+		Psyr_1401	0.62	-0.1
1,589,231	+		Psyr_1401	0.62	-0.1
1,589,231	+		Psyr_1401	0.62	-0.0
1,589,232	-		Psyr_1401	0.62	+0.1
1,589,232	-		Psyr_1401	0.62	+0.3
1,589,307	+		Psyr_1401	0.80	+1.5
1,589,308	-		Psyr_1401	0.80	-0.8
1,589,308	-		Psyr_1401	0.80	+1.0
1,589,309	+		Psyr_1401	0.80	-0.5
1,589,309	+		Psyr_1401	0.80	-0.1
1,589,309	+		Psyr_1401	0.80	-0.2
1,589,309	+		Psyr_1401	0.80	+1.0
1,589,310	-		Psyr_1401	0.81	-0.1
1,589,310	-		Psyr_1401	0.81	+0.1
1,589,310	-		Psyr_1401	0.81	-2.1
1,589,446	+		Psyr_1402	0.27	+0.9
1,589,447	-		Psyr_1402	0.28	+0.1
1,589,475	+		Psyr_1402	0.41	+1.4
1,589,591	+				-2.4
1,589,591	+				+0.3
1,589,857	-		Psyr_1403	0.88	-3.7
1,589,915	-				+2.7
1,589,915	-				+1.1
1,589,915	-				-0.6
1,590,036	+				+0.1
1,590,036	+				-1.3
1,590,201	-				-2.0
1,590,210	-				-1.8
1,590,210	-				-0.3
1,590,273	-				-0.7
1,590,298	-				+1.4
1,590,306	+				-2.2
1,590,307	-				-0.3
1,590,313	+				-2.6
1,590,371	+				-1.7
1,590,371	+				-1.1
1,590,372	-				-0.3
1,590,372	-				-0.9
1,590,372	-				-1.2
1,590,414	+				-1.0
1,590,414	+				-2.5
1,590,418	+				-0.0
1,590,457	-				+0.7
1,590,500	+				-0.1
1,590,501	-				-3.1
1,590,501	-				-1.2
1,590,503	+				-0.6
1,590,503	+				+0.4
1,590,504	-				-1.4
1,590,504	-				-0.2
1,590,504	-				+0.9
1,590,550	+				-0.1
1,590,550	+				-1.6
1,590,550	+				+2.3