Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1303

Experiment: KB with Rotenone 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rotenone 0.125 mg/ml
1,477,937	-				-0.9
1,478,097	+				+1.1
1,478,097	+				+0.7
1,478,098	-				-0.1
1,478,142	+				-1.1
1,478,142	+				+0.3
1,478,142	+				+0.4
1,478,143	-				+0.7
1,478,143	-				-0.4
1,478,143	-				+0.7
1,478,143	-				-0.1
1,478,143	-				+0.0
1,478,143	-				-0.9
1,478,143	-				+0.2
1,478,155	+				+3.0
1,478,155	+				+0.5
1,478,155	+				+0.7
1,478,155	+				-0.4
1,478,155	+				+0.7
1,478,155	+				+0.4
1,478,156	-				+0.3
1,478,156	-				+1.7
1,478,156	-				-1.2
1,478,156	-				+0.4
1,478,156	-				-0.5
1,478,218	+				-1.3
1,478,218	+				-0.4
1,478,219	-				+4.0
1,478,219	-				-0.5
1,478,222	+				+1.2
1,478,222	+				-0.4
1,478,222	+				-0.1
1,478,222	+				+0.2
1,478,222	+				-0.7
1,478,222	+				+0.6
1,478,222	+				-0.6
1,478,222	+				+0.4
1,478,222	+				+1.2
1,478,222	+				-1.7
1,478,222	+				-1.5
1,478,222	+				+1.0
1,478,222	+				+1.4
1,478,222	+				-0.3
1,478,222	+				+1.3
1,478,222	+				-0.7
1,478,223	-				+1.3
1,478,223	-				+0.3
1,478,223	-				-0.3
1,478,223	-				-1.3
1,478,223	-				-1.9
1,478,223	-				-0.0
1,478,223	-				-1.2
1,478,223	-				-0.1
1,478,223	-				+0.3
1,478,226	+				-0.6
1,478,226	+				+0.0
1,478,226	+				-1.1
1,478,226	+				+1.0
1,478,226	+				+1.0
1,478,226	+				+0.5
1,478,226	+				+0.7
1,478,226	+				-0.1
1,478,226	+				-1.3
1,478,226	+				-0.8
1,478,227	-				+0.1
1,478,227	-				+0.3
1,478,227	-				-1.0
1,478,227	-				-0.1
1,478,227	-				-0.7
1,478,227	-				-1.4
1,478,227	-				+1.1
1,478,227	-				-0.1
1,478,227	-				-1.5
1,478,227	-				+0.1
1,478,227	-				+0.1
1,478,263	+				+0.7
1,478,339	+				-0.3
1,478,339	+				-0.8
1,478,340	-				+0.4
1,478,340	-				-0.9
1,478,343	-				-0.5
1,478,350	+				-0.4
1,478,350	+				+1.2
1,478,350	+				+0.3
1,478,350	+				+0.5
1,478,350	+				-0.4
1,478,351	-				+0.7
1,478,370	-				+0.9
1,478,371	+				+1.1
1,478,372	-				+0.2
1,478,372	-				+2.7
1,478,372	-				-0.8
1,478,515	+				+2.3
1,478,516	-				-0.3
1,478,530	+				-0.5
1,478,530	+				+1.0
1,478,530	+				-0.4
1,478,530	+				+0.7
1,478,530	+				-0.7
1,478,530	+				-1.3
1,478,531	-				+0.3
1,478,531	-				+0.1
1,478,531	-				+1.0
1,478,531	-				-0.3
1,478,531	-				+2.9
1,478,531	-				-0.3
1,478,531	-				-0.3
1,478,535	+				+1.5
1,478,536	-				+1.3
1,478,601	+				+0.8
1,478,601	+				+0.3
1,478,602	-				+0.3
1,478,604	+				+0.6
1,478,604	+				-0.4
1,478,605	-				+0.1
1,478,605	-				+0.3
1,478,605	-				+2.7
1,478,640	+		Psyr_1303	0.12	-0.4
1,478,640	+		Psyr_1303	0.12	-0.3
1,478,640	+		Psyr_1303	0.12	+0.7
1,478,640	+		Psyr_1303	0.12	-0.1
1,478,641	-		Psyr_1303	0.12	+1.6
1,478,641	-		Psyr_1303	0.12	+0.5
1,478,641	-		Psyr_1303	0.12	+0.2
1,478,751	+		Psyr_1303	0.18	-2.3
1,478,821	-		Psyr_1303	0.23	+0.2
1,478,821	-		Psyr_1303	0.23	+0.1
1,478,853	+		Psyr_1303	0.25	+0.7
1,478,869	-		Psyr_1303	0.26	-0.4
1,478,892	+		Psyr_1303	0.27	-0.5
1,478,892	+		Psyr_1303	0.27	+0.3
1,478,892	+		Psyr_1303	0.27	-0.6
1,478,892	+		Psyr_1303	0.27	+0.0
1,478,893	-		Psyr_1303	0.27	+2.7
1,479,651	+		Psyr_1303	0.74	-0.3
1,479,720	+		Psyr_1303	0.78	+0.7
1,479,720	+		Psyr_1303	0.78	+0.3
1,479,720	+		Psyr_1303	0.78	+0.5
1,479,720	+		Psyr_1303	0.78	-0.5
1,479,720	+		Psyr_1303	0.78	+0.6
1,479,721	-		Psyr_1303	0.78	+1.0
1,479,721	-		Psyr_1303	0.78	+1.3
1,479,721	-		Psyr_1303	0.78	-0.9
1,480,152	-		Psyr_1304	0.13	+0.5
1,480,336	-		Psyr_1304	0.47	+0.8
1,480,454	-		Psyr_1304	0.69	+1.1
1,480,570	+				-0.4
1,480,570	+				+0.9
1,480,752	+		Psyr_1305	0.11	+1.9
1,480,951	-		Psyr_1305	0.26	+0.7