Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0976

Experiment: KB with Rotenone 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rotenone 0.125 mg/ml
1,107,363	+				-0.5
1,107,363	+				-1.1
1,107,364	-				+0.7
1,107,364	-				-0.6
1,107,365	+				-0.3
1,107,365	+				-1.0
1,107,365	+				-1.0
1,107,366	-				+1.3
1,107,366	-				+0.1
1,107,366	-				+0.0
1,107,366	-				-0.4
1,107,366	-				+1.3
1,107,366	-				+1.0
1,107,378	+				-0.9
1,107,378	+				-0.3
1,107,379	-				-1.3
1,107,379	-				+0.4
1,107,379	-				-1.1
1,107,379	-				+1.6
1,107,379	-				-0.2
1,107,390	+				+0.3
1,107,390	+				-0.0
1,107,390	+				+0.2
1,107,391	-				+2.1
1,107,391	-				-0.6
1,107,391	-				+1.1
1,107,391	-				+0.1
1,107,391	-				-0.3
1,107,398	+				+2.4
1,107,398	+				-0.8
1,107,398	+				-0.5
1,107,399	-				+0.1
1,107,399	-				+0.6
1,107,399	-				+0.9
1,107,399	-				-0.1
1,107,520	+		Psyr_0975	0.19	-0.2
1,107,520	+		Psyr_0975	0.19	-1.2
1,107,520	+		Psyr_0975	0.19	-0.0
1,107,520	+		Psyr_0975	0.19	+0.4
1,107,520	+		Psyr_0975	0.19	+0.6
1,107,520	+		Psyr_0975	0.19	-0.5
1,107,521	-		Psyr_0975	0.19	+1.2
1,107,522	+		Psyr_0975	0.19	-0.2
1,107,552	+		Psyr_0975	0.22	+0.9
1,107,553	-		Psyr_0975	0.23	-0.4
1,107,560	-		Psyr_0975	0.23	+0.2
1,107,727	+		Psyr_0975	0.41	+0.1
1,107,727	+		Psyr_0975	0.41	+0.0
1,107,728	-		Psyr_0975	0.41	+2.3
1,107,744	+		Psyr_0975	0.43	+0.6
1,107,745	-		Psyr_0975	0.43	+0.8
1,107,784	+		Psyr_0975	0.47	+0.6
1,107,785	-		Psyr_0975	0.47	-2.4
1,107,785	-		Psyr_0975	0.47	-0.1
1,108,256	+				+0.9
1,108,257	-				+0.4
1,108,299	-				+0.3
1,108,299	-				-0.1
1,108,340	+				+0.5
1,108,438	-				+0.0
1,108,637	+		Psyr_0976	0.18	+0.7
1,108,917	+		Psyr_0976	0.37	+0.2
1,109,011	-		Psyr_0976	0.43	+3.6
1,109,171	+		Psyr_0976	0.54	-0.6
1,109,171	+		Psyr_0976	0.54	-3.0
1,109,171	+		Psyr_0976	0.54	-1.6
1,109,171	+		Psyr_0976	0.54	-1.1
1,109,172	-		Psyr_0976	0.54	-1.1
1,109,172	-		Psyr_0976	0.54	+0.7
1,109,172	-		Psyr_0976	0.54	-0.3
1,109,172	-		Psyr_0976	0.54	-2.3
1,109,433	+		Psyr_0976	0.71	-0.5
1,109,434	-		Psyr_0976	0.71	-1.1
1,109,434	-		Psyr_0976	0.71	-2.2
1,109,584	-		Psyr_0976	0.81	-1.3
1,109,673	+		Psyr_0976	0.87	-2.6
1,109,673	+		Psyr_0976	0.87	-1.0
1,109,674	-		Psyr_0976	0.87	+0.1
1,109,796	-				-0.3
1,109,843	+				-0.1
1,109,843	+				+0.7
1,109,843	+				-3.3
1,109,844	-				-1.6
1,109,844	-				-2.4
1,109,910	-				+0.0
1,109,910	-				-0.7
1,110,215	+				+0.1
1,110,215	+				-0.8
1,110,215	+				-0.8
1,110,216	-				-1.9
1,110,216	-				+0.1
1,110,225	+				-3.2
1,110,225	+				-0.8
1,110,225	+				-0.0
1,110,229	+				+0.4
1,110,229	+				+0.2
1,110,229	+				-0.3
1,110,229	+				+0.5
1,110,230	-				+0.5
1,110,459	+				-0.5
1,110,459	+				+0.5
1,110,471	-				+0.5
1,110,473	+				-0.2
1,110,474	-				-0.3
1,110,483	-				+0.4
1,110,517	+				-0.5
1,110,517	+				+1.3
1,110,518	-				-0.6
1,110,518	-				-0.8
1,110,519	+				+0.1
1,110,534	+				-1.0
1,110,534	+				+0.9
1,110,534	+				+0.2
1,110,534	+				-0.4
1,110,534	+				-0.4
1,110,535	-				-0.3
1,110,535	-				+0.5
1,110,535	-				+0.5
1,110,535	-				+0.1
1,110,535	-				+0.1
1,110,536	+				+0.0
1,110,537	-				+3.3
1,110,537	-				+0.7
1,110,567	-				+0.9
1,110,567	-				-1.8
1,110,577	+				-0.3
1,110,578	-				-2.3
1,110,845	-				+0.2