Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_4134

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
4,295,850	-		Ga0059261_4132	0.85	-0.0
4,295,974	+				-0.5
4,295,974	+				-0.9
4,295,974	+				+0.0
4,295,977	+				-0.4
4,295,977	+				-0.2
4,295,977	+				+0.2
4,295,977	+				+0.2
4,295,977	+				+0.1
4,295,977	+				+0.2
4,295,977	+				-0.4
4,295,978	-				-0.7
4,295,978	-				-0.6
4,295,978	-				+0.1
4,295,978	-				-1.4
4,295,978	-				+0.2
4,295,978	-				-0.2
4,295,978	-				+1.6
4,295,990	-				-0.2
4,295,990	-				-0.4
4,295,998	+				-0.5
4,295,999	-				-1.1
4,296,256	-		Ga0059261_4133	0.70	+0.3
4,296,256	-		Ga0059261_4133	0.70	-0.1
4,296,278	+				+0.9
4,296,279	-		Ga0059261_4133	0.79	-0.7
4,296,280	+		Ga0059261_4133	0.79	+0.0
4,296,280	+		Ga0059261_4133	0.79	-0.3
4,296,281	-		Ga0059261_4133	0.80	-0.2
4,296,281	-		Ga0059261_4133	0.80	-0.0
4,296,281	-		Ga0059261_4133	0.80	-0.1
4,296,399	-		Ga0059261_4134	0.72	+0.0
4,296,399	-		Ga0059261_4134	0.72	-0.1
4,296,406	+		Ga0059261_4134	0.82	+0.6
4,296,407	-		Ga0059261_4134	0.83	+1.1
4,296,442	+				-0.6
4,296,442	+				-0.2
4,296,443	-				+0.4
4,296,528	+				-0.4
4,296,528	+				-0.5
4,296,529	-				-0.0
4,296,700	+		Ga0059261_4135	0.30	+0.5
4,296,700	+		Ga0059261_4135	0.30	+0.8
4,296,701	-		Ga0059261_4135	0.30	-0.9
4,296,728	-		Ga0059261_4135	0.35	+0.1
4,296,728	-		Ga0059261_4135	0.35	-0.0
4,296,728	-		Ga0059261_4135	0.35	+0.6
4,296,745	+		Ga0059261_4135	0.38	+0.3
4,296,745	+		Ga0059261_4135	0.38	-0.3
4,296,745	+		Ga0059261_4135	0.38	-0.0
4,296,746	-		Ga0059261_4135	0.38	+0.7
4,296,822	+		Ga0059261_4135	0.52	+0.3
4,296,831	+		Ga0059261_4135	0.54	+0.3
4,296,832	-		Ga0059261_4135	0.54	-0.3
4,296,832	-		Ga0059261_4135	0.54	+0.7
4,297,027	+				-0.5
4,297,027	+				-0.1
4,297,027	+				-1.1
4,297,028	-				-0.2
4,297,028	-				-0.1
4,297,028	-				-0.3
4,297,028	-				+0.4
4,297,098	+		Ga0059261_4136	0.19	+0.6
4,297,099	-		Ga0059261_4136	0.20	+0.8
4,297,099	-		Ga0059261_4136	0.20	-0.5
4,297,099	-		Ga0059261_4136	0.20	+0.4
4,297,099	-		Ga0059261_4136	0.20	-0.7
4,297,218	+		Ga0059261_4136	0.53	+0.6
4,297,218	+		Ga0059261_4136	0.53	-0.9
4,297,218	+		Ga0059261_4136	0.53	-0.5
4,297,219	-		Ga0059261_4136	0.53	+1.9
4,297,219	-		Ga0059261_4136	0.53	+0.7
4,297,219	-		Ga0059261_4136	0.53	+0.3
4,297,219	-		Ga0059261_4136	0.53	+0.4
4,297,219	-		Ga0059261_4136	0.53	+0.6
4,297,219	-		Ga0059261_4136	0.53	+0.8
4,297,257	+		Ga0059261_4136	0.64	-0.3
4,297,257	+		Ga0059261_4136	0.64	+0.2
4,297,258	-		Ga0059261_4136	0.64	-0.7
4,297,258	-		Ga0059261_4136	0.64	-1.0
4,297,258	-		Ga0059261_4136	0.64	-0.1
4,297,385	+				-1.6
4,297,386	-				-0.2
4,297,391	+				-0.1
4,297,392	-				-0.2
4,297,392	-				+0.6
4,297,392	-				+0.7