Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3237

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
3,370,246	+		Ga0059261_3236	0.65	+0.1
3,370,246	+		Ga0059261_3236	0.65	+0.2
3,370,246	+		Ga0059261_3236	0.65	+0.5
3,370,246	+				+1.0
3,370,246	+		Ga0059261_3236	0.65	-0.2
3,370,246	+		Ga0059261_3236	0.65	-0.0
3,370,246	+		Ga0059261_3236	0.65	-1.0
3,370,246	+		Ga0059261_3236	0.65	+0.2
3,370,246	+		Ga0059261_3236	0.65	-0.8
3,370,246	+		Ga0059261_3236	0.65	-0.0
3,370,246	+		Ga0059261_3236	0.65	-2.0
3,370,246	+		Ga0059261_3236	0.65	-0.3
3,370,246	+		Ga0059261_3236	0.65	-0.3
3,370,246	+		Ga0059261_3236	0.65	-0.0
3,370,246	+		Ga0059261_3236	0.65	-0.3
3,370,247	-		Ga0059261_3236	0.65	+0.7
3,370,247	-		Ga0059261_3236	0.65	-0.1
3,370,247	-		Ga0059261_3236	0.65	+0.2
3,370,247	-		Ga0059261_3236	0.65	+0.4
3,370,247	-		Ga0059261_3236	0.65	-0.1
3,370,247	-		Ga0059261_3236	0.65	-0.5
3,370,247	-		Ga0059261_3236	0.65	+0.4
3,370,247	-		Ga0059261_3236	0.65	-1.0
3,370,247	-		Ga0059261_3236	0.65	+0.3
3,370,247	-		Ga0059261_3236	0.65	+0.3
3,370,247	-		Ga0059261_3236	0.65	-0.4
3,370,247	-		Ga0059261_3236	0.65	-0.4
3,370,247	-		Ga0059261_3236	0.65	-0.1
3,370,571	+		Ga0059261_3236	0.77	+0.1
3,370,572	-		Ga0059261_3236	0.77	-0.4
3,370,584	-		Ga0059261_3236	0.78	-0.7
3,370,766	+		Ga0059261_3236	0.84	-0.0
3,370,767	-		Ga0059261_3236	0.84	+0.1
3,370,767	-		Ga0059261_3236	0.84	-0.6
3,370,767	-		Ga0059261_3236	0.84	-0.4
3,370,767	-		Ga0059261_3236	0.84	-1.3
3,370,767	-		Ga0059261_3236	0.84	+0.6
3,370,767	-		Ga0059261_3236	0.84	-0.5
3,370,767	-		Ga0059261_3236	0.84	-0.4
3,370,919	+				+0.1
3,370,919	+				-0.1
3,370,919	+				+0.2
3,370,919	+				-0.1
3,370,919	+				-0.2
3,370,919	+				-0.6
3,370,919	+				+0.8
3,370,919	+				+1.0
3,370,919	+				-0.6
3,370,919	+				+0.4
3,370,920	-				-0.2
3,370,920	-				-0.3
3,370,920	-				-0.2
3,370,920	-				+0.2
3,370,937	+				+0.1
3,370,937	+				+0.7
3,370,937	+				-1.0
3,370,937	+				-0.1
3,370,937	+				+1.4
3,370,937	+				-0.0
3,370,937	+				+0.2
3,370,937	+				+1.0
3,370,937	+				-0.3
3,370,937	+				-0.9
3,370,938	-				-0.0
3,370,938	-				+0.2
3,370,938	-				-0.6
3,370,938	-				+0.5
3,370,938	-				-0.0
3,370,938	-				+0.1
3,370,938	-				-0.3
3,370,938	-				-0.5
3,370,938	-				-0.5
3,370,938	-				-0.4
3,370,938	-				+0.0
3,370,938	-				+0.4
3,370,938	-				+0.2
3,370,938	-				-0.5
3,370,938	-				+0.2
3,371,105	+				-0.1
3,371,105	+				+1.0
3,371,105	+				+0.5
3,371,105	+				+0.3
3,371,105	+				+0.1
3,371,105	+				+0.6
3,371,106	-				-0.3
3,371,106	-				+0.3
3,371,106	-				-0.0
3,371,106	-				+1.4
3,371,106	-				-0.2
3,371,106	-				+1.6
3,371,106	-				-0.0
3,371,106	-				-0.1
3,371,106	-				+0.7
3,371,106	-				+0.2
3,371,106	-				+0.7
3,371,124	-				-0.3
3,371,277	+		Ga0059261_3237	0.16	+0.6
3,371,277	+		Ga0059261_3237	0.16	+1.2
3,371,482	+		Ga0059261_3237	0.53	+0.6
3,371,482	+		Ga0059261_3237	0.53	-0.7
3,371,482	+		Ga0059261_3237	0.53	+0.2
3,371,482	+		Ga0059261_3237	0.53	+0.4
3,371,483	-		Ga0059261_3237	0.53	+0.7
3,371,483	-		Ga0059261_3237	0.53	-0.7
3,371,483	-				+2.6
3,371,483	-		Ga0059261_3237	0.53	+0.2
3,371,698	+				+0.6
3,371,741	-				+1.2
3,371,741	-				+0.2
3,371,780	-				-0.1
3,371,840	+				+0.6
3,371,840	+				+1.0
3,371,841	-				+0.2
3,372,016	+				-0.5
3,372,016	+				-1.0
3,372,016	+				-0.3
3,372,017	-				-0.2
3,372,032	+				-1.1
3,372,032	+				-0.8
3,372,127	+				-0.3
3,372,127	+				-0.7
3,372,151	+				+0.3
3,372,151	+				+0.7
3,372,151	+				-1.0
3,372,151	+				-0.3
3,372,152	-				-0.0
3,372,152	-				+0.5
3,372,152	-				+0.2
3,372,152	-				+0.6
3,372,167	+				+0.3
3,372,167	+				+0.4
3,372,168	-				-0.2
3,372,168	-				-1.3
3,372,168	-				-0.1
3,372,208	+				+0.4
3,372,209	-				-0.6
3,372,221	+				+0.7
3,372,250	+				-0.2
3,372,253	+				+0.1
3,372,253	+				+1.0
3,372,253	+				-0.0
3,372,253	+				-1.2
3,372,253	+				+0.3
3,372,253	+				-0.9
3,372,253	+				-0.1
3,372,253	+				+1.0
3,372,253	+				-0.2
3,372,253	+				+0.2
3,372,253	+				-0.5
3,372,254	-				-0.0
3,372,254	-				-0.0
3,372,254	-				+1.3
3,372,254	-				+0.2
3,372,254	-				-0.0
3,372,254	-				-0.3
3,372,254	-				+1.0
3,372,254	-				+0.4
3,372,255	+				-0.7
3,372,255	+				+0.3
3,372,255	+				+0.2
3,372,255	+				-0.3
3,372,256	-				+0.4
3,372,256	-				+0.0
3,372,256	-				-0.1
3,372,256	-				+0.5
3,372,256	-				+0.3
3,372,256	-				-0.2
3,372,256	-				-0.6
3,372,256	-				+0.9
3,372,256	-				+0.5
3,372,337	+				-0.9
3,372,337	+				+0.2
3,372,338	-				+0.3
3,372,338	-				+0.2
3,372,338	-				-0.0
3,372,338	-				+0.8
3,372,343	+				+0.3
3,372,343	+				-0.2
3,372,343	+				+0.4
3,372,343	+				+0.4
3,372,343	+				-0.6
3,372,343	+				-0.6
3,372,343	+				+0.2
3,372,343	+				-0.1
3,372,344	-				+1.0
3,372,344	-				-0.1
3,372,344	-				+0.4
3,372,344	-				-0.0
3,372,344	-				-0.1
3,372,414	+				+1.0
3,372,414	+				-0.8
3,372,415	-				-1.0
3,372,415	-				+0.3
3,372,415	-				+1.1
3,372,415	-				+0.1
3,372,518	+				+0.8
3,372,519	-				+0.6
3,372,534	-				-0.3
3,372,534	-				+2.0
3,372,534	-				-0.2
3,372,629	+		Ga0059261_3238	0.41	-0.1
3,372,629	+		Ga0059261_3238	0.41	-1.1
3,372,629	+		Ga0059261_3238	0.41	-0.1
3,372,659	+		Ga0059261_3238	0.54	+0.2