Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2972

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
3,086,657	+		Ga0059261_2970	0.52	+0.7
3,086,657	+		Ga0059261_2970	0.52	-0.3
3,086,657	+		Ga0059261_2970	0.52	-0.1
3,086,657	+		Ga0059261_2970	0.52	-0.3
3,086,657	+		Ga0059261_2970	0.52	-0.3
3,086,657	+		Ga0059261_2970	0.52	+0.7
3,086,657	+		Ga0059261_2970	0.52	-0.6
3,086,657	+		Ga0059261_2970	0.52	-0.2
3,086,657	+		Ga0059261_2970	0.52	-0.8
3,086,657	+		Ga0059261_2970	0.52	-1.0
3,086,657	+		Ga0059261_2970	0.52	-0.2
3,086,657	+		Ga0059261_2970	0.52	-1.1
3,086,657	+		Ga0059261_2970	0.52	+0.1
3,086,657	+		Ga0059261_2970	0.52	-1.7
3,086,657	+		Ga0059261_2970	0.52	-0.2
3,086,658	-		Ga0059261_2970	0.52	+0.1
3,086,658	-		Ga0059261_2970	0.52	-0.1
3,086,658	-		Ga0059261_2970	0.52	-0.4
3,086,658	-		Ga0059261_2970	0.52	-1.1
3,086,658	-		Ga0059261_2970	0.52	-0.9
3,086,658	-		Ga0059261_2970	0.52	+0.0
3,086,658	-		Ga0059261_2970	0.52	-0.6
3,086,658	-		Ga0059261_2970	0.52	+0.6
3,086,658	-				+1.0
3,086,658	-		Ga0059261_2970	0.52	+0.5
3,086,658	-		Ga0059261_2970	0.52	-0.8
3,086,658	-		Ga0059261_2970	0.52	+0.2
3,086,658	-		Ga0059261_2970	0.52	-0.2
3,086,658	-		Ga0059261_2970	0.52	-0.8
3,086,858	+		Ga0059261_2970	0.73	+0.7
3,086,858	+		Ga0059261_2970	0.73	+0.4
3,086,859	-		Ga0059261_2970	0.73	-0.7
3,086,958	+		Ga0059261_2970	0.84	-0.6
3,086,958	+		Ga0059261_2970	0.84	-0.9
3,086,958	+		Ga0059261_2970	0.84	-0.8
3,086,959	-		Ga0059261_2970	0.84	-0.4
3,086,959	-		Ga0059261_2970	0.84	-0.2
3,086,959	-		Ga0059261_2970	0.84	-0.9
3,086,959	-		Ga0059261_2970	0.84	+0.3
3,087,397	-		Ga0059261_2971	0.69	+0.0
3,087,397	-		Ga0059261_2971	0.69	-1.0
3,087,442	-		Ga0059261_2971	0.80	-1.6
3,087,575	+				-1.6
3,087,575	+				+2.0
3,087,576	-				+0.2
3,087,593	-				-0.4
3,087,593	-				+0.0
3,087,751	+		Ga0059261_2972	0.16	-0.3
3,087,751	+		Ga0059261_2972	0.16	-0.3
3,087,751	+		Ga0059261_2972	0.16	-0.7
3,087,751	+		Ga0059261_2972	0.16	+1.0
3,087,751	+		Ga0059261_2972	0.16	-0.1
3,087,751	+		Ga0059261_2972	0.16	+0.1
3,087,752	-		Ga0059261_2972	0.16	-0.0
3,087,752	-		Ga0059261_2972	0.16	+0.3
3,087,752	-		Ga0059261_2972	0.16	+0.1
3,087,752	-		Ga0059261_2972	0.16	+0.5
3,087,752	-		Ga0059261_2972	0.16	+0.2
3,087,752	-		Ga0059261_2972	0.16	+0.3
3,087,752	-		Ga0059261_2972	0.16	+0.4
3,087,752	-		Ga0059261_2972	0.16	+0.3
3,087,752	-		Ga0059261_2972	0.16	-0.3
3,087,932	+		Ga0059261_2972	0.33	+0.1
3,087,932	+		Ga0059261_2972	0.33	-0.4
3,087,932	+		Ga0059261_2972	0.33	-0.1
3,087,932	+		Ga0059261_2972	0.33	+0.3
3,087,932	+		Ga0059261_2972	0.33	-0.1
3,087,932	+		Ga0059261_2972	0.33	-0.1
3,087,932	+		Ga0059261_2972	0.33	-0.1
3,087,932	+		Ga0059261_2972	0.33	+0.4
3,087,932	+		Ga0059261_2972	0.33	+0.0
3,087,932	+		Ga0059261_2972	0.33	+0.2
3,087,932	+		Ga0059261_2972	0.33	+0.0
3,087,932	+		Ga0059261_2972	0.33	-0.3
3,087,932	+		Ga0059261_2972	0.33	-0.2
3,087,933	-		Ga0059261_2972	0.34	+0.2
3,087,933	-		Ga0059261_2972	0.34	+0.3
3,087,933	-		Ga0059261_2972	0.34	+0.4
3,087,933	-		Ga0059261_2972	0.34	+0.5
3,087,933	-		Ga0059261_2972	0.34	+1.0
3,087,933	-		Ga0059261_2972	0.34	+0.3
3,087,933	-		Ga0059261_2972	0.34	+0.8
3,087,933	-		Ga0059261_2972	0.34	+0.3
3,087,933	-		Ga0059261_2972	0.34	+0.0
3,087,933	-		Ga0059261_2972	0.34	-0.4
3,087,933	-		Ga0059261_2972	0.34	+1.4
3,087,933	-		Ga0059261_2972	0.34	+1.6
3,087,933	-		Ga0059261_2972	0.34	-0.1
3,087,933	-		Ga0059261_2972	0.34	+0.0
3,087,933	-		Ga0059261_2972	0.34	+1.1
3,087,933	-		Ga0059261_2972	0.34	-0.9
3,087,934	+		Ga0059261_2972	0.34	+1.3
3,087,934	+		Ga0059261_2972	0.34	-0.4
3,087,935	-		Ga0059261_2972	0.34	-0.2
3,087,935	-		Ga0059261_2972	0.34	+0.2
3,087,935	-		Ga0059261_2972	0.34	+2.0
3,087,997	+		Ga0059261_2972	0.40	-0.1
3,087,998	-		Ga0059261_2972	0.40	+0.1
3,088,127	+		Ga0059261_2972	0.53	+0.4
3,088,127	+				+1.2
3,088,127	+		Ga0059261_2972	0.53	-0.1
3,088,127	+		Ga0059261_2972	0.53	+1.7
3,088,127	+		Ga0059261_2972	0.53	+1.0
3,088,127	+		Ga0059261_2972	0.53	+0.0
3,088,127	+		Ga0059261_2972	0.53	+0.2
3,088,128	-		Ga0059261_2972	0.53	+0.4
3,088,128	-		Ga0059261_2972	0.53	-0.4
3,088,128	-		Ga0059261_2972	0.53	+0.5
3,088,128	-		Ga0059261_2972	0.53	-0.0
3,088,128	-		Ga0059261_2972	0.53	+0.9
3,088,128	-		Ga0059261_2972	0.53	-0.4
3,088,128	-				+1.0
3,088,168	+		Ga0059261_2972	0.57	-0.0
3,088,168	+		Ga0059261_2972	0.57	+0.3
3,088,379	+		Ga0059261_2972	0.77	+0.6
3,088,380	-		Ga0059261_2972	0.77	+0.7
3,088,380	-		Ga0059261_2972	0.77	+1.4
3,088,380	-		Ga0059261_2972	0.77	+0.5
3,088,462	+		Ga0059261_2972	0.85	+1.0
3,088,463	-		Ga0059261_2972	0.85	-0.9
3,088,463	-		Ga0059261_2972	0.85	+0.2
3,088,575	+				-0.1
3,088,575	+				+1.7
3,088,575	+				+0.3
3,088,576	-				+0.2
3,088,614	+				-0.4
3,088,614	+				-0.8
3,088,627	+				-0.6
3,088,627	+				-0.5
3,088,627	+				+0.2
3,088,627	+				+0.1
3,088,628	-				+0.1
3,088,628	-				-0.3
3,088,628	-				-0.6
3,088,631	+				-0.5
3,088,631	+				-1.1
3,088,631	+				+0.5
3,088,631	+				+0.5
3,088,631	+				-0.8
3,088,631	+				-1.6
3,088,631	+				-0.3
3,088,632	-				-1.0
3,088,632	-				+0.1
3,088,798	+		Ga0059261_2973	0.52	-0.1
3,088,798	+		Ga0059261_2973	0.52	+0.6
3,088,798	+		Ga0059261_2973	0.52	+1.4
3,088,798	+		Ga0059261_2973	0.52	-1.3
3,088,799	-		Ga0059261_2973	0.53	+1.0
3,088,809	-		Ga0059261_2973	0.56	-1.4
3,088,867	+		Ga0059261_2973	0.76	+2.4
3,088,867	+		Ga0059261_2973	0.76	-0.4
3,088,867	+		Ga0059261_2973	0.76	+0.0
3,088,868	-		Ga0059261_2973	0.76	-0.2
3,088,868	-		Ga0059261_2973	0.76	-0.8
3,088,891	+		Ga0059261_2973	0.84	+0.0
3,088,891	+		Ga0059261_2973	0.84	-2.4
3,088,891	+		Ga0059261_2973	0.84	+0.0
3,088,891	+				+2.0
3,088,892	-		Ga0059261_2973	0.84	-0.2
3,088,909	+				-0.2
3,088,910	-				+0.1
3,088,910	-				-0.2
3,088,933	-				-0.1
3,089,030	+				+0.0
3,089,030	+				+0.7
3,089,030	+				-1.8
3,089,030	+				+0.0
3,089,030	+				-0.2
3,089,030	+				-0.6
3,089,030	+				-0.7
3,089,031	-				-0.1
3,089,031	-				+0.4
3,089,031	-				+0.5
3,089,031	-				+0.6
3,089,031	-				-0.3
3,089,031	-				+0.0
3,089,031	-				-0.6
3,089,031	-				-0.4
3,089,181	+		Ga0059261_2974	0.15	-1.0
3,089,182	-		Ga0059261_2974	0.15	+0.4
3,089,216	-		Ga0059261_2974	0.18	-0.4
3,089,216	-		Ga0059261_2974	0.18	+0.1
3,089,324	+		Ga0059261_2974	0.25	+0.7
3,089,325	-		Ga0059261_2974	0.25	-0.6
3,089,325	-		Ga0059261_2974	0.25	-0.2