Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2626

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
2,717,836	+		Ga0059261_2625	0.30	+0.6
2,717,836	+		Ga0059261_2625	0.30	+0.7
2,717,836	+		Ga0059261_2625	0.30	+0.1
2,717,983	-		Ga0059261_2625	0.47	-0.2
2,718,056	-		Ga0059261_2625	0.55	-1.7
2,718,066	-		Ga0059261_2625	0.56	+0.8
2,718,066	-		Ga0059261_2625	0.56	-0.1
2,718,066	-		Ga0059261_2625	0.56	-0.5
2,718,078	+		Ga0059261_2625	0.58	-0.3
2,718,078	+		Ga0059261_2625	0.58	+0.2
2,718,078	+		Ga0059261_2625	0.58	+0.0
2,718,078	+		Ga0059261_2625	0.58	-1.9
2,718,078	+		Ga0059261_2625	0.58	+0.2
2,718,078	+		Ga0059261_2625	0.58	+0.1
2,718,078	+		Ga0059261_2625	0.58	+1.0
2,718,079	-		Ga0059261_2625	0.58	-0.6
2,718,079	-		Ga0059261_2625	0.58	-0.2
2,718,079	-		Ga0059261_2625	0.58	+0.9
2,718,079	-		Ga0059261_2625	0.58	+0.9
2,718,079	-		Ga0059261_2625	0.58	-0.5
2,718,079	-		Ga0059261_2625	0.58	+1.1
2,718,079	-		Ga0059261_2625	0.58	-0.4
2,718,079	-		Ga0059261_2625	0.58	+0.5
2,718,123	+				+1.1
2,718,123	+		Ga0059261_2625	0.63	-0.5
2,718,123	+		Ga0059261_2625	0.63	-0.3
2,718,123	+		Ga0059261_2625	0.63	-0.1
2,718,123	+		Ga0059261_2625	0.63	+0.4
2,718,174	+		Ga0059261_2625	0.69	+0.6
2,718,174	+		Ga0059261_2625	0.69	+2.1
2,718,174	+		Ga0059261_2625	0.69	+0.8
2,718,174	+		Ga0059261_2625	0.69	-0.4
2,718,174	+		Ga0059261_2625	0.69	-0.7
2,718,175	-		Ga0059261_2625	0.69	+0.2
2,718,175	-		Ga0059261_2625	0.69	-0.5
2,718,175	-		Ga0059261_2625	0.69	-0.2
2,718,175	-		Ga0059261_2625	0.69	-0.1
2,718,175	-		Ga0059261_2625	0.69	-0.3
2,718,382	-				+0.6
2,718,382	-				+0.3
2,718,382	-				+0.2
2,718,382	-				-0.8
2,718,382	-				+0.1
2,718,405	+				+0.7
2,718,405	+				-0.8
2,718,405	+				-0.2
2,718,405	+				-0.1
2,718,405	+				-0.0
2,718,405	+				-0.9
2,718,405	+				+0.3
2,718,405	+				+0.5
2,718,405	+				+0.1
2,718,405	+				-0.4
2,718,405	+				-0.4
2,718,405	+				-0.6
2,718,405	+				+0.0
2,718,406	-				+0.8
2,718,406	-				+0.5
2,718,406	-				+0.1
2,718,406	-				-0.4
2,718,406	-				-0.3
2,718,406	-				+0.4
2,718,406	-				+0.6
2,718,406	-				-0.4
2,718,406	-				+0.5
2,718,406	-				-0.5
2,718,406	-				+0.6
2,718,406	-				-2.0
2,718,406	-				-0.0
2,718,406	-				-0.1
2,718,406	-				+0.2
2,718,406	-				+0.4
2,718,406	-				+0.1
2,718,415	+				+0.5
2,718,415	+				+0.4
2,718,416	-				+0.7
2,718,416	-				+1.1
2,718,446	-				+1.7
2,718,446	-				-1.3
2,718,500	+				-0.0
2,718,637	+				+0.5
2,718,637	+				+0.1
2,718,638	-				-0.2
2,718,638	-				-0.1
2,718,638	-				-0.0
2,718,881	+		Ga0059261_2626	0.21	-0.2
2,718,881	+		Ga0059261_2626	0.21	+0.8
2,718,881	+		Ga0059261_2626	0.21	+0.6
2,718,882	-		Ga0059261_2626	0.21	+0.1
2,718,882	-		Ga0059261_2626	0.21	-1.0
2,718,882	-		Ga0059261_2626	0.21	-1.2
2,718,882	-				+2.4
2,719,154	+		Ga0059261_2626	0.56	+0.6
2,719,154	+		Ga0059261_2626	0.56	-0.6
2,719,154	+		Ga0059261_2626	0.56	-0.3
2,719,154	+				+0.5
2,719,154	+				+3.1
2,719,154	+		Ga0059261_2626	0.56	+0.2
2,719,154	+		Ga0059261_2626	0.56	+0.1
2,719,155	-		Ga0059261_2626	0.56	-0.1
2,719,155	-		Ga0059261_2626	0.56	+0.3
2,719,155	-		Ga0059261_2626	0.56	+0.8
2,719,155	-		Ga0059261_2626	0.56	+0.1
2,719,155	-		Ga0059261_2626	0.56	+1.2
2,719,155	-		Ga0059261_2626	0.56	-0.0
2,719,155	-		Ga0059261_2626	0.56	+0.1
2,719,155	-		Ga0059261_2626	0.56	+0.8
2,719,155	-		Ga0059261_2626	0.56	+0.1
2,719,155	-		Ga0059261_2626	0.56	-0.7
2,719,155	-		Ga0059261_2626	0.56	+0.8
2,719,215	+		Ga0059261_2626	0.64	+0.8
2,719,216	-		Ga0059261_2626	0.64	-1.2
2,719,216	-		Ga0059261_2626	0.64	+0.7
2,719,287	+		Ga0059261_2626	0.73	+0.1
2,719,287	+		Ga0059261_2626	0.73	-0.3
2,719,288	-		Ga0059261_2626	0.73	+0.1
2,719,288	-		Ga0059261_2626	0.73	-0.9
2,719,564	+				-0.9
2,719,564	+				+0.9
2,719,564	+				-1.0
2,719,565	-				+0.1
2,719,607	-				-0.8
2,719,621	+				-0.5
2,719,621	+				-0.2
2,719,622	-				+0.4
2,719,622	-				+0.0
2,719,699	+		Ga0059261_2627	0.15	-0.4
2,719,699	+		Ga0059261_2627	0.15	-1.8
2,719,699	+		Ga0059261_2627	0.15	-0.1
2,719,699	+		Ga0059261_2627	0.15	+0.7
2,719,699	+		Ga0059261_2627	0.15	-0.2
2,719,700	-		Ga0059261_2627	0.15	+0.3
2,719,700	-		Ga0059261_2627	0.15	+0.7
2,719,700	-		Ga0059261_2627	0.15	+0.1
2,719,700	-		Ga0059261_2627	0.15	+0.1
2,719,792	+		Ga0059261_2627	0.25	+0.3
2,719,792	+		Ga0059261_2627	0.25	+1.5
2,719,906	+		Ga0059261_2627	0.36	+0.1
2,719,906	+		Ga0059261_2627	0.36	-0.3
2,719,906	+				+1.1
2,719,906	+		Ga0059261_2627	0.36	+0.6
2,719,906	+		Ga0059261_2627	0.36	+0.2
2,719,906	+		Ga0059261_2627	0.36	-0.2
2,719,906	+		Ga0059261_2627	0.36	+0.1
2,719,906	+		Ga0059261_2627	0.36	-0.8
2,719,906	+		Ga0059261_2627	0.36	-0.1
2,719,906	+		Ga0059261_2627	0.36	-0.6
2,719,907	-		Ga0059261_2627	0.36	-0.4
2,719,907	-		Ga0059261_2627	0.36	-0.1
2,719,907	-		Ga0059261_2627	0.36	+0.9
2,719,907	-		Ga0059261_2627	0.36	+0.1
2,719,907	-		Ga0059261_2627	0.36	+0.1
2,719,907	-		Ga0059261_2627	0.36	+0.4
2,719,907	-		Ga0059261_2627	0.36	+0.2
2,719,907	-		Ga0059261_2627	0.36	+0.2
2,719,942	+		Ga0059261_2627	0.40	-0.2
2,720,041	+		Ga0059261_2627	0.50	+0.2
2,720,042	-		Ga0059261_2627	0.50	+0.1
2,720,074	+		Ga0059261_2627	0.54	+0.4
2,720,074	+		Ga0059261_2627	0.54	+2.4
2,720,074	+		Ga0059261_2627	0.54	+1.2
2,720,074	+		Ga0059261_2627	0.54	-0.1
2,720,074	+		Ga0059261_2627	0.54	+0.4
2,720,074	+				+0.1
2,720,074	+		Ga0059261_2627	0.54	-0.4
2,720,074	+		Ga0059261_2627	0.54	-0.1
2,720,074	+		Ga0059261_2627	0.54	+0.1
2,720,074	+		Ga0059261_2627	0.54	+0.2
2,720,074	+		Ga0059261_2627	0.54	-0.6
2,720,075	-		Ga0059261_2627	0.54	-0.4
2,720,075	-		Ga0059261_2627	0.54	-0.6
2,720,075	-		Ga0059261_2627	0.54	+0.9
2,720,075	-		Ga0059261_2627	0.54	+0.3
2,720,075	-		Ga0059261_2627	0.54	-0.1
2,720,075	-		Ga0059261_2627	0.54	-0.4
2,720,075	-		Ga0059261_2627	0.54	+0.3
2,720,075	-		Ga0059261_2627	0.54	+0.3
2,720,075	-		Ga0059261_2627	0.54	+1.5
2,720,161	+		Ga0059261_2627	0.62	+0.2
2,720,308	+		Ga0059261_2627	0.77	+1.1
2,720,309	-		Ga0059261_2627	0.77	-0.8
2,720,309	-		Ga0059261_2627	0.77	+0.2