Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2618

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
2,706,369	-				+0.8
2,706,632	-		Ga0059261_2617	0.11	-0.1
2,706,716	+		Ga0059261_2617	0.27	-0.2
2,706,874	+		Ga0059261_2617	0.55	-0.3
2,706,874	+		Ga0059261_2617	0.55	+0.1
2,706,874	+		Ga0059261_2617	0.55	-0.8
2,706,875	-		Ga0059261_2617	0.56	-0.4
2,706,875	-		Ga0059261_2617	0.56	+1.1
2,707,022	+		Ga0059261_2617	0.83	-0.1
2,707,022	+		Ga0059261_2617	0.83	+0.3
2,707,023	-		Ga0059261_2617	0.83	+0.7
2,707,023	-		Ga0059261_2617	0.83	-0.3
2,707,023	-		Ga0059261_2617	0.83	+1.3
2,707,023	-		Ga0059261_2617	0.83	-0.3
2,707,121	+				-0.4
2,707,121	+				+0.2
2,707,121	+				-0.5
2,707,121	+				-0.2
2,707,121	+				-1.3
2,707,121	+				+0.3
2,707,121	+				+0.5
2,707,122	-				-0.6
2,707,122	-				+1.1
2,707,122	-				+0.5
2,707,122	-				+0.8
2,707,123	+				-0.6
2,707,123	+				+0.4
2,707,123	+				-0.8
2,707,123	+				-0.1
2,707,123	+				+0.2
2,707,124	-				-0.0
2,707,124	-				-0.5
2,707,124	-				-0.4
2,707,124	-				+0.3
2,707,124	-				-0.1
2,707,124	-				+0.7
2,707,340	+				-0.3
2,707,341	-				-0.1
2,707,357	+				-0.6
2,707,358	-				-0.5
2,707,386	-				+0.9
2,707,386	-				-0.8
2,707,386	-				+0.7
2,707,713	+		Ga0059261_2618	0.81	+1.8
2,707,713	+		Ga0059261_2618	0.81	+0.8
2,707,713	+		Ga0059261_2618	0.81	+0.8
2,707,714	-				-0.9
2,707,714	-		Ga0059261_2618	0.81	-0.2
2,707,714	-		Ga0059261_2618	0.81	-0.2
2,707,815	+				-0.1
2,707,816	+				+0.1
2,707,816	+				-0.0
2,707,816	+				+1.0
2,707,816	+				-0.3
2,707,816	+				-0.2
2,707,817	-				+0.3
2,707,817	-				+1.1
2,707,817	-				+0.6
2,707,817	-				-1.7
2,707,817	-				-0.4
2,707,817	-				-0.5
2,707,817	-				+0.2
2,707,875	-				+0.8
2,707,886	+				+0.4
2,707,886	+				+0.9
2,707,886	+				+0.9
2,707,886	+				-1.1
2,707,886	+				+0.3
2,707,887	-				-0.5
2,707,887	-				-0.3
2,707,887	-				-0.4
2,708,049	+		Ga0059261_2619	0.14	-0.1
2,708,049	+		Ga0059261_2619	0.14	-0.1
2,708,092	+		Ga0059261_2619	0.18	-0.1
2,708,163	+		Ga0059261_2619	0.24	-0.0
2,708,164	-		Ga0059261_2619	0.25	-0.6
2,708,268	+		Ga0059261_2619	0.34	-0.1
2,708,268	+		Ga0059261_2619	0.34	-0.7
2,708,268	+		Ga0059261_2619	0.34	-0.2
2,708,268	+		Ga0059261_2619	0.34	-0.4
2,708,268	+		Ga0059261_2619	0.34	+0.6
2,708,269	-		Ga0059261_2619	0.34	+0.1
2,708,269	-		Ga0059261_2619	0.34	-0.7
2,708,269	-		Ga0059261_2619	0.34	-0.5
2,708,269	-		Ga0059261_2619	0.34	-2.1
2,708,269	-				+1.7
2,708,269	-		Ga0059261_2619	0.34	-0.4
2,708,715	+		Ga0059261_2619	0.76	+1.1
2,708,715	+		Ga0059261_2619	0.76	-0.1
2,708,716	-		Ga0059261_2619	0.76	+0.9
2,708,716	-		Ga0059261_2619	0.76	+0.4
2,708,716	-		Ga0059261_2619	0.76	-0.4
2,708,733	+		Ga0059261_2619	0.77	+0.3
2,708,733	+		Ga0059261_2619	0.77	+0.1
2,708,733	+		Ga0059261_2619	0.77	-0.6
2,708,733	+		Ga0059261_2619	0.77	+0.7
2,708,733	+		Ga0059261_2619	0.77	+0.8
2,708,733	+		Ga0059261_2619	0.77	+0.3
2,708,734	-		Ga0059261_2619	0.77	+1.2
2,708,734	-		Ga0059261_2619	0.77	-0.9
2,708,734	-		Ga0059261_2619	0.77	+0.7
2,708,734	-		Ga0059261_2619	0.77	-0.2
2,708,734	-		Ga0059261_2619	0.77	-0.1
2,708,734	-		Ga0059261_2619	0.77	-0.2
2,708,775	+		Ga0059261_2619	0.81	+0.5
2,708,775	+		Ga0059261_2619	0.81	+0.3
2,708,775	+		Ga0059261_2619	0.81	-0.6
2,708,775	+		Ga0059261_2619	0.81	+0.2
2,708,776	-		Ga0059261_2619	0.81	+0.7
2,708,776	-		Ga0059261_2619	0.81	-0.4
2,708,776	-		Ga0059261_2619	0.81	-0.2
2,708,776	-		Ga0059261_2619	0.81	+0.3
2,708,776	-		Ga0059261_2619	0.81	+0.3
2,708,776	-		Ga0059261_2619	0.81	-0.6
2,708,776	-		Ga0059261_2619	0.81	+0.1
2,708,776	-		Ga0059261_2619	0.81	+1.1
2,708,776	-		Ga0059261_2619	0.81	+0.2
2,708,778	+		Ga0059261_2619	0.81	-0.4
2,708,778	+		Ga0059261_2619	0.81	+0.3
2,708,779	-		Ga0059261_2619	0.81	+0.3