Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2358

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
2,459,836	+		Ga0059261_2356	0.37	+0.0
2,459,836	+		Ga0059261_2356	0.37	-0.0
2,459,836	+		Ga0059261_2356	0.37	-0.4
2,459,836	+		Ga0059261_2356	0.37	+0.1
2,459,836	+		Ga0059261_2356	0.37	-0.1
2,459,837	-		Ga0059261_2356	0.37	+0.8
2,459,876	+				+1.1
2,459,876	+		Ga0059261_2356	0.46	+0.1
2,459,876	+		Ga0059261_2356	0.46	+0.0
2,459,877	-		Ga0059261_2356	0.46	-0.7
2,459,877	-		Ga0059261_2356	0.46	+0.3
2,459,877	-		Ga0059261_2356	0.46	+0.1
2,459,877	-		Ga0059261_2356	0.46	+0.1
2,459,877	-		Ga0059261_2356	0.46	-0.3
2,459,878	+		Ga0059261_2356	0.46	-0.9
2,459,878	+		Ga0059261_2356	0.46	-0.2
2,459,878	+		Ga0059261_2356	0.46	+0.8
2,459,878	+		Ga0059261_2356	0.46	-0.6
2,459,879	-		Ga0059261_2356	0.47	+0.1
2,459,916	+		Ga0059261_2356	0.55	+0.4
2,459,916	+		Ga0059261_2356	0.55	+0.6
2,459,916	+		Ga0059261_2356	0.55	-0.0
2,459,916	+		Ga0059261_2356	0.55	+0.6
2,459,916	+		Ga0059261_2356	0.55	-0.6
2,459,916	+		Ga0059261_2356	0.55	-0.8
2,459,916	+				+0.1
2,459,916	+		Ga0059261_2356	0.55	-0.3
2,459,916	+		Ga0059261_2356	0.55	-0.3
2,459,916	+		Ga0059261_2356	0.55	+1.1
2,459,916	+		Ga0059261_2356	0.55	+0.9
2,459,916	+		Ga0059261_2356	0.55	+0.4
2,459,916	+		Ga0059261_2356	0.55	+2.1
2,459,916	+		Ga0059261_2356	0.55	+0.2
2,459,917	-		Ga0059261_2356	0.55	+0.3
2,459,917	-		Ga0059261_2356	0.55	+0.4
2,459,917	-		Ga0059261_2356	0.55	+0.7
2,459,917	-		Ga0059261_2356	0.55	-0.0
2,459,917	-		Ga0059261_2356	0.55	+0.6
2,459,917	-		Ga0059261_2356	0.55	-0.9
2,459,917	-		Ga0059261_2356	0.55	-0.0
2,459,917	-		Ga0059261_2356	0.55	-0.3
2,459,917	-		Ga0059261_2356	0.55	-0.3
2,459,917	-		Ga0059261_2356	0.55	+0.5
2,459,917	-		Ga0059261_2356	0.55	+0.9
2,459,917	-		Ga0059261_2356	0.55	-0.3
2,459,917	-		Ga0059261_2356	0.55	-0.3
2,459,917	-		Ga0059261_2356	0.55	+0.7
2,459,917	-		Ga0059261_2356	0.55	+0.1
2,459,917	-		Ga0059261_2356	0.55	+0.3
2,459,917	-		Ga0059261_2356	0.55	+0.8
2,459,917	-		Ga0059261_2356	0.55	-0.3
2,459,917	-		Ga0059261_2356	0.55	+0.9
2,459,937	+		Ga0059261_2356	0.60	-0.1
2,459,937	+		Ga0059261_2356	0.60	+0.1
2,459,937	+		Ga0059261_2356	0.60	+0.2
2,459,937	+		Ga0059261_2356	0.60	+0.6
2,459,937	+		Ga0059261_2356	0.60	+0.7
2,459,937	+		Ga0059261_2356	0.60	-1.2
2,459,949	-		Ga0059261_2356	0.62	-0.4
2,459,949	-		Ga0059261_2356	0.62	+0.8
2,459,949	-		Ga0059261_2356	0.62	-0.4
2,460,035	-		Ga0059261_2356	0.81	+0.6
2,460,090	+				+0.6
2,460,090	+				-0.3
2,460,090	+				-0.4
2,460,090	+				+0.8
2,460,090	+				-0.3
2,460,091	-				+1.4
2,460,187	-		Ga0059261_2357	0.16	-0.1
2,460,245	-		Ga0059261_2357	0.29	+1.1
2,460,246	+		Ga0059261_2357	0.29	+0.1
2,460,246	+		Ga0059261_2357	0.29	-1.2
2,460,246	+		Ga0059261_2357	0.29	+0.0
2,460,246	+		Ga0059261_2357	0.29	-0.2
2,460,246	+		Ga0059261_2357	0.29	-0.4
2,460,246	+				+0.1
2,460,246	+		Ga0059261_2357	0.29	-0.3
2,460,246	+		Ga0059261_2357	0.29	+0.3
2,460,246	+		Ga0059261_2357	0.29	-0.4
2,460,246	+		Ga0059261_2357	0.29	-0.5
2,460,246	+		Ga0059261_2357	0.29	+0.8
2,460,247	-		Ga0059261_2357	0.29	+0.4
2,460,247	-		Ga0059261_2357	0.29	-0.3
2,460,247	-		Ga0059261_2357	0.29	+0.6
2,460,247	-		Ga0059261_2357	0.29	-0.3
2,460,344	+		Ga0059261_2357	0.51	+0.3
2,460,344	+		Ga0059261_2357	0.51	+0.1
2,460,344	+		Ga0059261_2357	0.51	+0.4
2,460,344	+		Ga0059261_2357	0.51	+0.2
2,460,344	+		Ga0059261_2357	0.51	+0.6
2,460,344	+		Ga0059261_2357	0.51	+0.1
2,460,345	-		Ga0059261_2357	0.51	-0.2
2,460,345	-		Ga0059261_2357	0.51	-0.3
2,460,345	-		Ga0059261_2357	0.51	-0.1
2,460,345	-		Ga0059261_2357	0.51	+0.1
2,460,345	-		Ga0059261_2357	0.51	+0.7
2,460,345	-		Ga0059261_2357	0.51	-0.9
2,460,345	-		Ga0059261_2357	0.51	+0.2
2,460,345	-		Ga0059261_2357	0.51	+0.6
2,460,345	-		Ga0059261_2357	0.51	+0.1
2,460,355	+		Ga0059261_2357	0.53	+0.1
2,460,356	-		Ga0059261_2357	0.53	+0.6
2,460,386	+		Ga0059261_2357	0.60	-0.2
2,460,386	+		Ga0059261_2357	0.60	+0.1
2,460,386	+		Ga0059261_2357	0.60	-0.1
2,460,420	+		Ga0059261_2357	0.67	-0.0
2,460,420	+		Ga0059261_2357	0.67	+0.0
2,460,420	+		Ga0059261_2357	0.67	-0.4
2,460,423	+		Ga0059261_2357	0.68	-1.0
2,460,423	+		Ga0059261_2357	0.68	+0.7
2,460,424	-		Ga0059261_2357	0.68	+0.0
2,460,424	-		Ga0059261_2357	0.68	+1.1
2,460,424	-		Ga0059261_2357	0.68	-0.3
2,460,519	+		Ga0059261_2357	0.89	+0.4
2,460,519	+		Ga0059261_2357	0.89	-0.1
2,460,520	-		Ga0059261_2357	0.89	-0.2
2,460,526	+				+0.3
2,460,526	+				-0.7
2,460,527	-				-0.1
2,460,527	-				+1.0
2,460,527	-				+1.1
2,460,527	-				+0.1
2,460,537	-				+0.5
2,460,576	+				+0.7
2,460,576	+				+0.1
2,460,577	-				+0.7
2,460,614	+				+0.5
2,460,614	+				+0.2
2,460,614	+				-0.3
2,460,614	+				-0.4
2,460,614	+				-0.4
2,460,615	-				-0.7
2,460,615	-				-0.1
2,460,615	-				+1.1
2,460,645	+				-0.9
2,460,645	+				+0.6
2,460,645	+				+0.5
2,460,646	-				-0.7
2,460,646	-				-0.3
2,460,688	+				-0.4
2,460,689	-				-0.4
2,460,689	-				-0.4
2,460,689	-				+0.5
2,460,689	-				-0.1
2,460,689	-				+0.1
2,460,748	+		Ga0059261_2358	0.30	+0.4
2,460,748	+		Ga0059261_2358	0.30	+0.0
2,460,748	+		Ga0059261_2358	0.30	+0.2
2,460,748	+		Ga0059261_2358	0.30	+0.3
2,460,748	+		Ga0059261_2358	0.30	+1.1
2,460,748	+		Ga0059261_2358	0.30	-1.4
2,460,748	+		Ga0059261_2358	0.30	+0.0
2,460,748	+		Ga0059261_2358	0.30	+0.6
2,460,749	-		Ga0059261_2358	0.31	+0.0
2,460,749	-		Ga0059261_2358	0.31	+0.3
2,460,749	-		Ga0059261_2358	0.31	-0.5
2,460,749	-		Ga0059261_2358	0.31	-0.0
2,460,749	-		Ga0059261_2358	0.31	-0.6
2,460,749	-		Ga0059261_2358	0.31	+0.7
2,460,749	-		Ga0059261_2358	0.31	+0.8
2,460,749	-		Ga0059261_2358	0.31	+0.0
2,460,825	-		Ga0059261_2358	0.67	+0.3
2,460,841	+		Ga0059261_2358	0.75	-0.5
2,460,841	+		Ga0059261_2358	0.75	+0.9
2,460,841	+		Ga0059261_2358	0.75	+0.1
2,460,842	-		Ga0059261_2358	0.75	+0.2
2,460,842	-		Ga0059261_2358	0.75	+0.2
2,460,842	-		Ga0059261_2358	0.75	+0.6
2,460,842	-		Ga0059261_2358	0.75	-0.1
2,460,842	-		Ga0059261_2358	0.75	+0.4
2,460,842	-		Ga0059261_2358	0.75	-0.4
2,460,842	-		Ga0059261_2358	0.75	+0.0
2,460,871	+		Ga0059261_2358	0.89	+0.8
2,460,871	+		Ga0059261_2358	0.89	+0.3
2,460,871	+		Ga0059261_2358	0.89	+1.1
2,460,871	+		Ga0059261_2358	0.89	+0.2
2,460,871	+		Ga0059261_2358	0.89	-1.2
2,460,872	-		Ga0059261_2358	0.90	+0.7
2,460,872	-		Ga0059261_2358	0.90	+0.1
2,460,872	-		Ga0059261_2358	0.90	+0.9
2,461,768	+				+0.4
2,461,768	+				+1.5
2,461,768	+				+0.6
2,461,768	+				-0.7
2,461,768	+				+0.9
2,461,768	+				+0.9
2,461,768	+				-0.4
2,461,768	+				+0.1
2,461,769	-				+0.5
2,461,769	-				+0.7
2,461,769	-				+0.1
2,461,769	-				-1.3
2,461,769	-				-0.6
2,461,769	-				+0.2
2,461,769	-				-0.2
2,461,769	-				+1.1