Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2050

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
2,153,350	+		Ga0059261_2049	0.37	+0.0
2,153,548	+		Ga0059261_2049	0.51	+0.1
2,153,549	-		Ga0059261_2049	0.51	-0.0
2,153,785	+		Ga0059261_2049	0.68	+1.1
2,153,786	-		Ga0059261_2049	0.69	-0.5
2,154,087	+				+0.8
2,154,087	+				-0.2
2,154,088	-				-1.0
2,154,088	-				-1.0
2,154,212	+				-0.2
2,154,212	+				-1.0
2,154,212	+				+0.1
2,154,212	+				+0.4
2,154,212	+				-0.7
2,154,213	-				+0.8
2,154,213	-				-0.9
2,154,213	-				-1.6
2,154,213	-				+0.0
2,154,213	-				+0.0
2,154,213	-				-0.4
2,154,213	-				+1.4
2,154,213	-				-0.6
2,154,214	+				-0.4
2,154,214	+				-0.9
2,154,214	+				-0.1
2,154,214	+				+0.0
2,154,214	+				-0.2
2,154,214	+				-0.4
2,154,214	+				-0.1
2,154,214	+				+0.4
2,154,214	+				+0.8
2,154,214	+				+0.4
2,154,214	+				+0.0
2,154,214	+				-0.6
2,154,214	+				-1.2
2,154,214	+				-0.9
2,154,214	+				+0.0
2,154,214	+				-1.2
2,154,214	+				-0.3
2,154,214	+				-0.4
2,154,214	+				+0.4
2,154,214	+				+0.2
2,154,215	-				+0.9
2,154,215	-				-0.0
2,154,215	-				+0.2
2,154,215	-				+0.2
2,154,215	-				+0.9
2,154,215	-				-0.8
2,154,215	-				+0.8
2,154,215	-				-0.6
2,154,215	-				-0.9
2,154,215	-				-0.5
2,154,215	-				-0.2
2,154,215	-				+0.3
2,154,215	-				+0.7
2,154,215	-				-0.6
2,154,319	+		Ga0059261_2050	0.42	+0.1
2,154,319	+		Ga0059261_2050	0.42	+0.1
2,154,320	-		Ga0059261_2050	0.43	+0.1
2,154,320	-		Ga0059261_2050	0.43	+0.5
2,154,451	+				+0.1
2,154,452	-				-0.1
2,154,452	-				-0.1
2,154,560	+				+0.3
2,154,560	+				+0.2
2,154,560	+				+0.1
2,154,560	+				-0.1
2,154,560	+				+0.1
2,154,560	+				+0.2
2,154,560	+				+0.0
2,154,560	+				-0.4
2,154,560	+				+0.7
2,154,560	+				-0.3
2,154,560	+				+0.6
2,154,560	+				-0.4
2,154,560	+				+0.5
2,154,560	+				-0.0
2,154,560	+				-0.4
2,154,560	+				+2.1
2,154,560	+				-0.0
2,154,560	+				-1.2
2,154,561	-				-0.7
2,154,561	-				+2.6
2,154,561	-				+0.5
2,154,561	-				+0.1
2,154,561	-				+0.7
2,154,561	-				+0.7
2,154,561	-				-1.3
2,154,561	-				+0.2
2,154,561	-				+0.5
2,154,561	-				-0.8
2,154,561	-				-0.0
2,154,561	-				-0.2
2,154,561	-				-0.9
2,154,561	-				+0.2
2,154,561	-				+0.2
2,154,561	-				-0.6
2,154,561	-				+0.0
2,154,561	-				+1.5
2,154,566	+				-0.0
2,154,566	+				-0.9
2,154,566	+				-0.3
2,154,567	-				-0.4
2,154,567	-				+1.6
2,154,567	-				+0.0
2,154,702	-		Ga0059261_2051	0.18	+0.0
2,154,702	-		Ga0059261_2051	0.18	-0.4
2,154,702	-		Ga0059261_2051	0.18	+0.3
2,154,702	-		Ga0059261_2051	0.18	+0.1
2,155,115	+		Ga0059261_2051	0.51	+0.5
2,155,115	+		Ga0059261_2051	0.51	+0.1
2,155,116	-		Ga0059261_2051	0.51	-0.8
2,155,116	-		Ga0059261_2051	0.51	-0.1
2,155,116	-		Ga0059261_2051	0.51	+0.3
2,155,205	+		Ga0059261_2051	0.58	+0.6
2,155,205	+		Ga0059261_2051	0.58	+0.2
2,155,205	+		Ga0059261_2051	0.58	-0.1
2,155,205	+		Ga0059261_2051	0.58	-0.1
2,155,205	+		Ga0059261_2051	0.58	+0.7
2,155,205	+		Ga0059261_2051	0.58	+1.1
2,155,205	+		Ga0059261_2051	0.58	-0.3
2,155,206	-		Ga0059261_2051	0.58	-0.3
2,155,206	-		Ga0059261_2051	0.58	+2.5
2,155,206	-		Ga0059261_2051	0.58	-0.1
2,155,206	-		Ga0059261_2051	0.58	-0.4
2,155,206	-				-0.9
2,155,376	+		Ga0059261_2051	0.72	-0.9
2,155,376	+				+1.1
2,155,376	+		Ga0059261_2051	0.72	-0.1
2,155,376	+		Ga0059261_2051	0.72	+1.0
2,155,376	+		Ga0059261_2051	0.72	+0.7
2,155,376	+		Ga0059261_2051	0.72	-0.2
2,155,376	+		Ga0059261_2051	0.72	-0.3
2,155,376	+		Ga0059261_2051	0.72	+1.1
2,155,377	-		Ga0059261_2051	0.72	-1.5
2,155,377	-		Ga0059261_2051	0.72	-0.2
2,155,377	-		Ga0059261_2051	0.72	+1.1
2,155,377	-		Ga0059261_2051	0.72	+0.2
2,155,377	-		Ga0059261_2051	0.72	+0.8
2,155,377	-		Ga0059261_2051	0.72	-0.3
2,155,377	-		Ga0059261_2051	0.72	-0.2
2,155,424	+		Ga0059261_2051	0.75	-0.3
2,155,424	+		Ga0059261_2051	0.75	-0.0
2,155,424	+		Ga0059261_2051	0.75	+0.0
2,155,424	+		Ga0059261_2051	0.75	-0.3
2,155,424	+		Ga0059261_2051	0.75	+0.1
2,155,424	+		Ga0059261_2051	0.75	-0.4
2,155,424	+		Ga0059261_2051	0.75	-0.7
2,155,425	-		Ga0059261_2051	0.76	-1.9
2,155,425	-		Ga0059261_2051	0.76	-0.8
2,155,425	-		Ga0059261_2051	0.76	-0.4
2,155,425	-		Ga0059261_2051	0.76	-0.6
2,155,433	+		Ga0059261_2051	0.76	+0.2
2,155,433	+		Ga0059261_2051	0.76	+0.3
2,155,433	+		Ga0059261_2051	0.76	+0.1
2,155,433	+		Ga0059261_2051	0.76	+0.2
2,155,434	-		Ga0059261_2051	0.76	-0.4