Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1743

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
1,845,671	+				-0.4
1,845,671	+				-0.3
1,845,671	+				-0.5
1,845,671	+				-0.3
1,845,672	-				+0.6
1,845,686	+				+0.3
1,845,686	+				+0.2
1,845,686	+				+1.1
1,845,686	+				-0.1
1,845,687	-				-0.1
1,845,687	-				+0.8
1,845,687	-				+0.2
1,845,831	+		Ga0059261_1741	0.10	+0.2
1,845,831	+		Ga0059261_1741	0.10	+0.3
1,845,832	-		Ga0059261_1741	0.11	+0.6
1,845,832	-		Ga0059261_1741	0.11	-0.3
1,845,887	+		Ga0059261_1741	0.35	+0.2
1,845,888	-		Ga0059261_1741	0.36	-0.1
1,845,888	-		Ga0059261_1741	0.36	-0.2
1,845,888	-		Ga0059261_1741	0.36	+0.1
1,845,897	+		Ga0059261_1741	0.40	-0.5
1,845,977	+		Ga0059261_1741	0.75	+0.5
1,845,977	+		Ga0059261_1741	0.75	-0.8
1,845,977	+		Ga0059261_1741	0.75	+0.7
1,845,977	+		Ga0059261_1741	0.75	-0.1
1,845,978	-		Ga0059261_1741	0.76	-0.0
1,845,978	-		Ga0059261_1741	0.76	+0.9
1,845,978	-		Ga0059261_1741	0.76	-0.1
1,845,978	-		Ga0059261_1741	0.76	+0.1
1,845,978	-		Ga0059261_1741	0.76	-1.5
1,846,069	+				+0.5
1,846,069	+				+0.3
1,846,069	+				+0.1
1,846,077	+				-0.5
1,846,077	+				-0.6
1,846,077	+				+0.3
1,846,077	+				-0.0
1,846,077	+				+0.4
1,846,077	+				-0.3
1,846,078	-				-0.1
1,846,078	-				-0.0
1,846,078	-				+0.1
1,846,078	-				+0.4
1,846,344	+		Ga0059261_1742	0.42	+0.1
1,846,345	-		Ga0059261_1742	0.42	-1.5
1,846,457	+				+0.5
1,846,457	+		Ga0059261_1742	0.65	-0.1
1,846,470	-		Ga0059261_1742	0.67	+0.6
1,846,470	-		Ga0059261_1742	0.67	+0.4
1,846,471	+				-0.9
1,846,471	+		Ga0059261_1742	0.67	+0.1
1,846,471	+		Ga0059261_1742	0.67	+0.5
1,846,472	-		Ga0059261_1742	0.68	-0.6
1,846,472	-		Ga0059261_1742	0.68	-0.4
1,846,472	-		Ga0059261_1742	0.68	-0.6
1,846,472	-		Ga0059261_1742	0.68	+0.3
1,846,487	+		Ga0059261_1742	0.71	-0.2
1,846,508	+		Ga0059261_1742	0.75	-0.0
1,846,508	+		Ga0059261_1742	0.75	-0.1
1,846,509	-		Ga0059261_1742	0.75	+0.0
1,846,509	-		Ga0059261_1742	0.75	+1.3
1,846,631	+				-0.2
1,846,631	+				-0.6
1,846,631	+				-0.4
1,846,631	+				-0.6
1,846,631	+				+0.5
1,846,632	-				+0.3
1,846,632	-				+0.1
1,846,632	-				-0.5
1,846,632	-				-0.1
1,846,632	-				-0.3
1,846,658	+				+3.4
1,846,658	+				-0.2
1,846,659	-				-0.1
1,846,659	-				-1.1
1,846,659	-				-0.5
1,846,659	-				-0.4
1,846,659	-				+1.1
1,846,675	+				-0.1
1,846,691	-		Ga0059261_1743	0.12	+0.7
1,846,759	-		Ga0059261_1743	0.52	-1.0
1,846,759	-		Ga0059261_1743	0.52	+0.7
1,846,838	+				-0.7
1,846,839	-				-0.1
1,846,839	-				+0.8
1,846,844	+				+0.2
1,846,844	+				+0.3
1,846,844	+				+0.2
1,846,845	-				+0.4
1,846,845	-				-0.8
1,846,845	-				+0.3
1,846,944	+				+0.9
1,846,944	+				+0.5
1,846,944	+				-0.2
1,846,944	+				-0.4
1,846,944	+				-0.2
1,846,945	-				+0.1
1,846,945	-				+0.8
1,846,945	-				-0.9
1,846,945	-				-0.1
1,846,966	+		Ga0059261_1744	0.11	+0.2
1,846,966	+		Ga0059261_1744	0.11	-0.5
1,846,966	+		Ga0059261_1744	0.11	-0.1
1,846,966	+		Ga0059261_1744	0.11	-0.1
1,846,966	+		Ga0059261_1744	0.11	+0.2
1,846,966	+		Ga0059261_1744	0.11	-0.3
1,846,967	-		Ga0059261_1744	0.12	-0.6
1,846,967	-		Ga0059261_1744	0.12	-1.5
1,846,967	-		Ga0059261_1744	0.12	+0.2
1,846,978	+		Ga0059261_1744	0.13	-0.2
1,846,993	+		Ga0059261_1744	0.14	-0.4
1,846,993	+		Ga0059261_1744	0.14	+0.2
1,846,993	+		Ga0059261_1744	0.14	+0.9
1,846,993	+		Ga0059261_1744	0.14	+0.1
1,846,993	+		Ga0059261_1744	0.14	+0.5
1,846,993	+		Ga0059261_1744	0.14	+0.4
1,846,993	+		Ga0059261_1744	0.14	+0.4
1,846,993	+		Ga0059261_1744	0.14	-0.2
1,846,993	+		Ga0059261_1744	0.14	+0.2
1,846,994	-		Ga0059261_1744	0.15	+0.1
1,846,994	-		Ga0059261_1744	0.15	+0.6
1,846,994	-		Ga0059261_1744	0.15	-0.5
1,846,994	-		Ga0059261_1744	0.15	-0.5
1,846,994	-		Ga0059261_1744	0.15	-0.7
1,847,122	+		Ga0059261_1744	0.29	+1.1
1,847,122	+		Ga0059261_1744	0.29	+0.2
1,847,122	+		Ga0059261_1744	0.29	-0.3
1,847,123	-		Ga0059261_1744	0.29	-0.1
1,847,139	+		Ga0059261_1744	0.31	-0.2
1,847,139	+		Ga0059261_1744	0.31	-0.8
1,847,140	-				+0.5
1,847,152	+		Ga0059261_1744	0.32	-0.3
1,847,152	+		Ga0059261_1744	0.32	-0.2
1,847,153	-		Ga0059261_1744	0.32	+0.6
1,847,153	-		Ga0059261_1744	0.32	+0.2
1,847,153	-		Ga0059261_1744	0.32	-0.3
1,847,215	+		Ga0059261_1744	0.39	-0.2
1,847,215	+		Ga0059261_1744	0.39	+0.4
1,847,215	+				+1.1
1,847,215	+		Ga0059261_1744	0.39	-0.1
1,847,216	-				-0.9
1,847,216	-		Ga0059261_1744	0.39	-0.1
1,847,216	-		Ga0059261_1744	0.39	-0.8
1,847,216	-		Ga0059261_1744	0.39	-0.4
1,847,261	-		Ga0059261_1744	0.44	+0.5
1,847,261	-		Ga0059261_1744	0.44	-2.1
1,847,261	-		Ga0059261_1744	0.44	+0.5
1,847,261	-		Ga0059261_1744	0.44	-2.3
1,847,261	-		Ga0059261_1744	0.44	-0.8
1,847,266	+		Ga0059261_1744	0.45	+1.5
1,847,266	+		Ga0059261_1744	0.45	+0.2
1,847,266	+		Ga0059261_1744	0.45	+1.1
1,847,266	+		Ga0059261_1744	0.45	-0.4
1,847,266	+		Ga0059261_1744	0.45	+0.2
1,847,266	+		Ga0059261_1744	0.45	+0.2
1,847,266	+		Ga0059261_1744	0.45	+0.6
1,847,266	+		Ga0059261_1744	0.45	-0.2
1,847,266	+		Ga0059261_1744	0.45	-0.0
1,847,267	-		Ga0059261_1744	0.45	-1.5
1,847,267	-		Ga0059261_1744	0.45	+0.2
1,847,267	-		Ga0059261_1744	0.45	-0.7
1,847,267	-		Ga0059261_1744	0.45	-0.1
1,847,267	-		Ga0059261_1744	0.45	+0.5
1,847,267	-		Ga0059261_1744	0.45	-0.0
1,847,267	-		Ga0059261_1744	0.45	+0.6
1,847,267	-		Ga0059261_1744	0.45	-0.2
1,847,267	-		Ga0059261_1744	0.45	+0.3
1,847,267	-		Ga0059261_1744	0.45	-1.3
1,847,267	-		Ga0059261_1744	0.45	+0.3
1,847,344	+		Ga0059261_1744	0.53	+0.2
1,847,370	-		Ga0059261_1744	0.56	-0.7
1,847,370	-		Ga0059261_1744	0.56	-0.3
1,847,370	-		Ga0059261_1744	0.56	+0.1
1,847,506	+		Ga0059261_1744	0.71	+0.4
1,847,507	-		Ga0059261_1744	0.71	+0.6
1,847,557	+		Ga0059261_1744	0.77	+0.9
1,847,557	+		Ga0059261_1744	0.77	-0.7
1,847,557	+		Ga0059261_1744	0.77	+0.5
1,847,557	+		Ga0059261_1744	0.77	+1.1
1,847,558	-		Ga0059261_1744	0.77	-0.1
1,847,558	-		Ga0059261_1744	0.77	+0.0
1,847,558	-		Ga0059261_1744	0.77	-0.4
1,847,558	-		Ga0059261_1744	0.77	+0.3
1,847,608	+		Ga0059261_1744	0.83	-0.3
1,847,608	+		Ga0059261_1744	0.83	+1.1
1,847,608	+		Ga0059261_1744	0.83	+0.7
1,847,608	+		Ga0059261_1744	0.83	-0.4
1,847,609	-		Ga0059261_1744	0.83	+0.2
1,847,609	-		Ga0059261_1744	0.83	+0.3
1,847,772	+				-1.7
1,847,772	+				+0.8
1,847,772	+				-0.7
1,847,772	+				-0.5
1,847,772	+				+1.1
1,847,772	+				+0.9
1,847,773	-				-1.3
1,847,773	-				-0.2
1,847,779	-				-0.1
1,847,779	-				-0.2
1,847,779	-				+0.1
1,847,779	-				-0.3
1,847,833	-				+0.1