Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1724

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
1,830,843	+		Ga0059261_1723	0.16	+0.4
1,830,843	+		Ga0059261_1723	0.16	-0.5
1,830,844	-		Ga0059261_1723	0.16	-0.1
1,830,844	-		Ga0059261_1723	0.16	+1.6
1,830,844	-		Ga0059261_1723	0.16	+0.6
1,830,844	-		Ga0059261_1723	0.16	+0.3
1,830,900	+		Ga0059261_1723	0.21	-0.5
1,830,900	+		Ga0059261_1723	0.21	+0.5
1,830,900	+		Ga0059261_1723	0.21	-0.5
1,830,900	+		Ga0059261_1723	0.21	+1.9
1,830,900	+		Ga0059261_1723	0.21	-0.0
1,830,900	+		Ga0059261_1723	0.21	-0.2
1,830,900	+		Ga0059261_1723	0.21	-0.0
1,830,901	-		Ga0059261_1723	0.21	-0.5
1,830,901	-		Ga0059261_1723	0.21	+0.2
1,830,901	-		Ga0059261_1723	0.21	-0.1
1,830,901	-		Ga0059261_1723	0.21	+0.3
1,830,901	-		Ga0059261_1723	0.21	+0.7
1,830,901	-		Ga0059261_1723	0.21	+0.3
1,830,901	-		Ga0059261_1723	0.21	-0.7
1,830,972	+		Ga0059261_1723	0.28	-0.6
1,831,601	-		Ga0059261_1723	0.84	-0.4
1,831,601	-		Ga0059261_1723	0.84	+0.1
1,831,601	-		Ga0059261_1723	0.84	-0.5
1,831,601	-		Ga0059261_1723	0.84	+0.1
1,831,601	-		Ga0059261_1723	0.84	+0.1
1,831,601	-		Ga0059261_1723	0.84	-0.1
1,831,601	-				+1.1
1,831,694	+				-0.4
1,831,694	+				+0.5
1,831,694	+				+0.4
1,831,694	+				+1.0
1,831,695	-				+0.6
1,831,695	-				-0.8
1,831,695	-				+1.1
1,831,744	+				-0.6
1,831,744	+				-0.2
1,831,744	+				+0.9
1,831,987	+		Ga0059261_1724	0.59	+0.4
1,831,987	+		Ga0059261_1724	0.59	+0.1
1,831,988	-		Ga0059261_1724	0.59	+0.3
1,831,988	-		Ga0059261_1724	0.59	+0.8
1,832,052	-		Ga0059261_1724	0.78	+1.6
1,832,114	-				+0.2
1,832,139	+				-0.5
1,832,139	+				+0.8
1,832,139	+				-0.2
1,832,140	-				+0.1
1,832,140	-				+0.1
1,832,140	-				+0.6
1,832,254	+		Ga0059261_1725	0.21	+0.5
1,832,255	-		Ga0059261_1725	0.21	-0.4
1,832,255	-		Ga0059261_1725	0.21	+0.1
1,832,255	-		Ga0059261_1725	0.21	-0.3
1,832,264	+		Ga0059261_1725	0.23	+0.3
1,832,373	+		Ga0059261_1725	0.42	+0.4
1,832,373	+		Ga0059261_1725	0.42	+1.1
1,832,373	+		Ga0059261_1725	0.42	+0.2
1,832,373	+		Ga0059261_1725	0.42	-2.3
1,832,373	+				+0.1
1,832,373	+		Ga0059261_1725	0.42	-0.1
1,832,374	-		Ga0059261_1725	0.42	-0.4
1,832,374	-		Ga0059261_1725	0.42	-0.5
1,832,374	-		Ga0059261_1725	0.42	-0.2
1,832,374	-		Ga0059261_1725	0.42	-0.1
1,832,374	-		Ga0059261_1725	0.42	+0.2
1,832,374	-		Ga0059261_1725	0.42	+0.5
1,832,374	-		Ga0059261_1725	0.42	+0.8
1,832,481	+		Ga0059261_1725	0.61	+1.1
1,832,481	+		Ga0059261_1725	0.61	-0.4
1,832,482	-		Ga0059261_1725	0.62	+0.6
1,832,482	-		Ga0059261_1725	0.62	-0.1
1,832,700	+				+0.3
1,832,700	+				-0.8
1,832,700	+				-0.7
1,832,701	-				+0.2
1,832,701	-				-0.2
1,832,787	+		Ga0059261_1726	0.15	-1.2
1,832,787	+		Ga0059261_1726	0.15	-0.2
1,832,788	-		Ga0059261_1726	0.15	+0.4
1,832,788	-		Ga0059261_1726	0.15	+0.1
1,832,799	+				-0.5
1,832,799	+		Ga0059261_1726	0.17	-0.5
1,832,799	+		Ga0059261_1726	0.17	-0.5
1,832,799	+		Ga0059261_1726	0.17	-0.1
1,832,799	+		Ga0059261_1726	0.17	+2.5
1,832,799	+				+1.5
1,832,800	-		Ga0059261_1726	0.17	-0.3
1,832,800	-		Ga0059261_1726	0.17	+0.5
1,832,800	-		Ga0059261_1726	0.17	+0.1
1,832,800	-		Ga0059261_1726	0.17	+1.1
1,832,800	-		Ga0059261_1726	0.17	-0.1
1,832,813	+		Ga0059261_1726	0.19	+0.5
1,832,813	+		Ga0059261_1726	0.19	-0.3
1,832,814	-		Ga0059261_1726	0.20	+1.9
1,832,814	-		Ga0059261_1726	0.20	-0.0
1,832,814	-		Ga0059261_1726	0.20	+0.1
1,832,814	-		Ga0059261_1726	0.20	+0.1
1,832,814	-		Ga0059261_1726	0.20	+0.1
1,832,873	-		Ga0059261_1726	0.29	-0.5
1,832,906	+		Ga0059261_1726	0.34	+0.6
1,832,907	-		Ga0059261_1726	0.35	+0.3
1,832,907	-		Ga0059261_1726	0.35	+0.1
1,833,040	-		Ga0059261_1726	0.56	+0.6