Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_12510

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
2,853,723	+		AO356_12500	0.70	+0.3
2,853,723	+		AO356_12500	0.70	-1.0
2,853,723	+		AO356_12500	0.70	-1.0
2,853,723	+		AO356_12500	0.70	-1.4
2,853,723	+		AO356_12500	0.70	-2.0
2,853,723	+		AO356_12500	0.70	-1.8
2,853,723	+		AO356_12500	0.70	+0.3
2,853,723	+		AO356_12500	0.70	-1.1
2,853,723	+		AO356_12500	0.70	-0.4
2,853,723	+		AO356_12500	0.70	+1.3
2,853,723	+		AO356_12500	0.70	-1.2
2,853,724	-		AO356_12500	0.70	-0.6
2,853,724	-		AO356_12500	0.70	-0.9
2,853,724	-		AO356_12500	0.70	+1.5
2,853,724	-		AO356_12500	0.70	-0.1
2,853,724	-		AO356_12500	0.70	+1.6
2,853,724	-		AO356_12500	0.70	-0.5
2,853,724	-		AO356_12500	0.70	-1.2
2,853,724	-		AO356_12500	0.70	-3.6
2,853,724	-		AO356_12500	0.70	-1.2
2,853,724	-		AO356_12500	0.70	-1.1
2,853,724	-		AO356_12500	0.70	-1.0
2,853,724	-		AO356_12500	0.70	-1.6
2,853,724	-		AO356_12500	0.70	-2.9
2,853,724	-		AO356_12500	0.70	-1.9
2,853,724	-		AO356_12500	0.70	-2.3
2,853,724	-		AO356_12500	0.70	-0.1
2,853,753	+		AO356_12500	0.74	-0.6
2,853,753	+		AO356_12500	0.74	-2.2
2,853,753	+		AO356_12500	0.74	-1.1
2,853,754	-		AO356_12500	0.74	-0.3
2,853,754	-		AO356_12500	0.74	-1.3
2,853,872	+				-0.9
2,853,872	+				-2.4
2,853,872	+				+1.3
2,853,872	+				-3.3
2,853,872	+				-3.5
2,853,873	-				-1.3
2,853,873	-				-1.6
2,853,873	-				-0.2
2,854,277	+		AO356_12505	0.82	-0.0
2,854,277	+		AO356_12505	0.82	+0.5
2,854,277	+		AO356_12505	0.82	+0.5
2,854,277	+		AO356_12505	0.82	-0.2
2,854,277	+		AO356_12505	0.82	-0.1
2,854,277	+		AO356_12505	0.82	+0.4
2,854,277	+		AO356_12505	0.82	-0.3
2,854,277	+		AO356_12505	0.82	+1.0
2,854,277	+		AO356_12505	0.82	-0.2
2,854,277	+		AO356_12505	0.82	+0.8
2,854,277	+		AO356_12505	0.82	-2.5
2,854,277	+		AO356_12505	0.82	-0.7
2,854,277	+		AO356_12505	0.82	-0.5
2,854,277	+		AO356_12505	0.82	+0.2
2,854,277	+		AO356_12505	0.82	-0.8
2,854,277	+		AO356_12505	0.82	+1.6
2,854,277	+		AO356_12505	0.82	+0.3
2,854,277	+		AO356_12505	0.82	+0.2
2,854,278	-		AO356_12505	0.82	-0.3
2,854,278	-		AO356_12505	0.82	-1.2
2,854,278	-		AO356_12505	0.82	+0.9
2,854,278	-		AO356_12505	0.82	-0.1
2,854,278	-		AO356_12505	0.82	-0.9
2,854,278	-		AO356_12505	0.82	-0.4
2,854,278	-		AO356_12505	0.82	-0.1
2,854,278	-		AO356_12505	0.82	-0.8
2,854,278	-		AO356_12505	0.82	-0.3
2,854,278	-		AO356_12505	0.82	-0.1
2,854,278	-		AO356_12505	0.82	+0.5
2,854,278	-		AO356_12505	0.82	+0.0
2,854,278	-		AO356_12505	0.82	+0.1
2,854,278	-		AO356_12505	0.82	-0.0
2,854,343	-				+0.2
2,854,381	-				-1.3
2,854,467	+				-0.6
2,854,513	-				-0.4
2,854,561	+				-1.7
2,854,561	+				+1.1
2,854,562	-				-0.6
2,854,665	-				+0.7
2,854,682	+				-1.0
2,854,683	-				-0.5
2,854,686	+				-0.3
2,854,686	+				-0.8
2,854,686	+				-0.9
2,854,686	+				-1.0
2,854,688	+				+0.5
2,854,700	-				+0.7
2,854,707	+				-1.5
2,854,707	-				+1.3
2,854,726	+				+0.5
2,854,726	+				+0.4
2,854,751	+				-1.5
2,854,779	+				-0.1
2,854,805	-				+0.5
2,854,805	-				+0.1
2,854,810	-				+0.1
2,854,838	+		AO356_12510	0.11	-0.9
2,854,838	+		AO356_12510	0.11	-0.8
2,854,838	+		AO356_12510	0.11	-2.2
2,854,838	+		AO356_12510	0.11	+0.4
2,854,839	-		AO356_12510	0.11	+0.4
2,854,839	-		AO356_12510	0.11	+0.2
2,854,839	-		AO356_12510	0.11	+0.0
2,854,839	-		AO356_12510	0.11	-1.8
2,854,893	+		AO356_12510	0.15	-0.6
2,854,893	+		AO356_12510	0.15	-1.6
2,854,894	-		AO356_12510	0.15	+1.2
2,855,100	+		AO356_12510	0.32	+0.2
2,855,509	+		AO356_12510	0.66	+0.6
2,855,510	-		AO356_12510	0.66	-0.1
2,855,516	+		AO356_12510	0.67	-1.2
2,855,517	-		AO356_12510	0.67	-0.5
2,855,517	-		AO356_12510	0.67	-0.1
2,855,517	-		AO356_12510	0.67	+1.1
2,855,704	+		AO356_12510	0.82	-0.1
2,855,704	+		AO356_12510	0.82	-1.1
2,855,704	+		AO356_12510	0.82	+0.3
2,855,704	+		AO356_12510	0.82	-1.1
2,855,705	-		AO356_12510	0.82	+0.2
2,855,705	-		AO356_12510	0.82	+1.3
2,855,705	-		AO356_12510	0.82	+0.5
2,855,813	+				-0.7
2,855,813	+				-0.3
2,855,814	-				-0.6
2,855,814	-				-0.5
2,855,837	+				-0.8
2,855,837	+				+0.2
2,855,862	+				+2.1
2,855,884	+				+0.1
2,855,884	+				+0.8
2,855,885	-				+0.1
2,855,954	+				-1.0
2,855,954	+				+1.2
2,855,954	+				-0.4
2,855,955	-				+1.5
2,855,955	-				-1.1
2,855,955	-				-1.1
2,855,964	+				-0.2
2,856,007	+				-1.2
2,856,013	+				-0.4
2,856,013	+				-0.7
2,856,013	+				-2.6
2,856,013	+				+0.4
2,856,013	+				-0.0
2,856,013	+				-0.6
2,856,013	+				+0.0
2,856,013	+				+0.4
2,856,013	+				-0.4
2,856,013	+				-1.6
2,856,013	+				-0.5
2,856,013	+				-0.2
2,856,013	+				-0.6
2,856,013	+				-0.8
2,856,013	+				-0.0
2,856,013	+				-0.1
2,856,013	+				+0.3
2,856,013	+				+0.1
2,856,013	+				+0.2
2,856,013	+				+0.2
2,856,013	+				-0.5
2,856,013	+				-0.1
2,856,014	-				-1.7
2,856,014	-				+0.5
2,856,014	-				+1.2
2,856,014	-				-0.2
2,856,014	-				-0.7
2,856,014	-				+0.3
2,856,014	-				-0.4
2,856,014	-				+0.4
2,856,014	-				-0.0
2,856,014	-				-1.0
2,856,014	-				+0.3
2,856,014	-				+0.6
2,856,014	-				-0.3
2,856,014	-				+0.8
2,856,190	+		AO356_12515	0.23	-0.0
2,856,190	+		AO356_12515	0.23	-2.1
2,856,232	+		AO356_12515	0.28	-2.5
2,856,358	+		AO356_12515	0.44	-0.0
2,856,358	+		AO356_12515	0.44	-1.3
2,856,358	+		AO356_12515	0.44	-0.9
2,856,359	-		AO356_12515	0.44	-1.2
2,856,359	-		AO356_12515	0.44	-1.3
2,856,359	-		AO356_12515	0.44	-1.8
2,856,359	-		AO356_12515	0.44	-1.0
2,856,365	-		AO356_12515	0.45	-0.5
2,856,471	+		AO356_12515	0.59	-0.8
2,856,580	+		AO356_12515	0.73	-0.5
2,856,634	+		AO356_12515	0.80	-2.4
2,856,635	-		AO356_12515	0.80	-1.6
2,856,761	+				-1.0
2,856,762	-				+0.1
2,856,791	+				-0.5
2,856,818	+				-2.5
2,856,818	+				-2.0
2,856,818	+				-1.8
2,856,818	+				-0.7
2,856,819	-				+0.2
2,856,823	+				-2.4
2,856,823	+				-2.1
2,856,824	-				-0.7
2,856,824	-				+0.5
2,856,838	+				-0.3
2,856,838	+				-0.9
2,856,838	+				-2.1
2,856,838	+				-2.5
2,856,838	+				-0.8
2,856,838	+				-2.3
2,856,839	-				+0.5
2,856,839	-				-0.6
2,856,839	-				+0.3
2,856,839	-				-0.3
2,856,839	-				-1.6
2,856,839	-				+0.3
2,856,842	+				-2.5
2,856,842	+				-1.3
2,856,846	+				+0.2