Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_08705

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
1,958,470	+		AO356_08700	0.42	-0.8
1,959,549	-		AO356_08705	0.39	-1.6
1,959,549	-		AO356_08705	0.39	+0.5
1,959,553	+		AO356_08705	0.39	+1.5
1,959,553	+		AO356_08705	0.39	+0.6
1,959,553	+		AO356_08705	0.39	+0.9
1,959,553	+		AO356_08705	0.39	+1.2
1,959,571	+		AO356_08705	0.41	+1.1
1,959,571	+		AO356_08705	0.41	-0.6
1,959,572	-		AO356_08705	0.41	+1.4
1,959,572	-		AO356_08705	0.41	+1.0
1,959,572	-		AO356_08705	0.41	+1.7
1,959,661	+		AO356_08705	0.49	+0.7
1,959,661	+		AO356_08705	0.49	+1.6
1,959,661	+		AO356_08705	0.49	+1.3
1,959,662	-		AO356_08705	0.49	+1.1
1,959,662	-		AO356_08705	0.49	+1.5
1,959,973	+		AO356_08705	0.79	-0.4
1,959,973	+		AO356_08705	0.79	+0.5
1,959,974	-		AO356_08705	0.79	+1.6
1,959,974	-		AO356_08705	0.79	+1.9
1,959,974	-		AO356_08705	0.79	+0.6
1,959,974	-		AO356_08705	0.79	-0.5
1,959,974	-		AO356_08705	0.79	-0.6
1,959,974	-		AO356_08705	0.79	+0.5
1,959,974	-		AO356_08705	0.79	-0.1
1,959,974	-		AO356_08705	0.79	+1.4
1,959,974	-		AO356_08705	0.79	-0.1
1,960,015	+		AO356_08705	0.83	+1.3
1,960,016	-		AO356_08705	0.83	+0.9
1,960,195	+				+1.4
1,960,195	+				+1.1
1,960,196	-				-0.1
1,960,196	-				+1.1
1,960,196	-				+0.8
1,960,196	-				+1.2
1,960,250	-				+0.6
1,960,333	+		AO356_08710	0.16	+0.8
1,960,333	+		AO356_08710	0.16	-1.1
1,960,333	+		AO356_08710	0.16	+0.4
1,960,333	+		AO356_08710	0.16	+0.7
1,960,333	+		AO356_08710	0.16	+0.5
1,960,334	-		AO356_08710	0.16	+0.6
1,960,334	-		AO356_08710	0.16	+0.1
1,960,334	-		AO356_08710	0.16	+0.0
1,960,337	+		AO356_08710	0.17	+0.9
1,960,337	+		AO356_08710	0.17	+0.7
1,960,337	+		AO356_08710	0.17	-0.1
1,960,337	+		AO356_08710	0.17	+0.7
1,960,337	+		AO356_08710	0.17	+1.0
1,960,337	+		AO356_08710	0.17	+0.2
1,960,337	+		AO356_08710	0.17	+1.4
1,960,337	+		AO356_08710	0.17	+0.7
1,960,338	-		AO356_08710	0.17	+0.8
1,960,338	-		AO356_08710	0.17	+0.2
1,960,338	-		AO356_08710	0.17	+0.5
1,960,338	-		AO356_08710	0.17	+1.8
1,960,338	-		AO356_08710	0.17	+0.5
1,960,338	-		AO356_08710	0.17	+0.7
1,960,338	-		AO356_08710	0.17	+0.8
1,960,338	-		AO356_08710	0.17	+1.5
1,960,396	+		AO356_08710	0.24	+0.6
1,960,396	+		AO356_08710	0.24	-0.1
1,960,397	-		AO356_08710	0.24	+0.3
1,960,410	-		AO356_08710	0.25	+0.2
1,960,422	-		AO356_08710	0.27	+0.6
1,960,422	-		AO356_08710	0.27	+1.0
1,960,422	-		AO356_08710	0.27	+1.3
1,960,594	+		AO356_08710	0.47	+1.1
1,960,594	+		AO356_08710	0.47	+1.0
1,960,594	+		AO356_08710	0.47	+0.3
1,960,594	+		AO356_08710	0.47	+0.4
1,960,595	-		AO356_08710	0.47	+0.8
1,960,663	+		AO356_08710	0.55	-1.1
1,960,663	+		AO356_08710	0.55	+0.4
1,960,663	+		AO356_08710	0.55	+4.0
1,960,664	-		AO356_08710	0.55	+1.5
1,960,664	-		AO356_08710	0.55	+0.8
1,960,664	-		AO356_08710	0.55	+2.5
1,960,664	-		AO356_08710	0.55	+0.2
1,960,664	-		AO356_08710	0.55	+3.0
1,960,664	-		AO356_08710	0.55	-0.2
1,960,711	+		AO356_08710	0.61	+0.9
1,960,801	+		AO356_08710	0.71	+1.9
1,960,802	-		AO356_08710	0.71	-0.4
1,960,802	-		AO356_08710	0.71	+0.2
1,960,825	+		AO356_08710	0.74	+0.4
1,960,825	+		AO356_08710	0.74	+0.2
1,960,839	-		AO356_08710	0.76	+0.6
1,960,889	+		AO356_08710	0.82	+0.6
1,960,889	+		AO356_08710	0.82	+0.5
1,960,889	+		AO356_08710	0.82	+0.8
1,960,889	+		AO356_08710	0.82	+1.3
1,960,889	+		AO356_08710	0.82	+0.9
1,960,889	+		AO356_08710	0.82	+0.7
1,960,890	-		AO356_08710	0.82	+2.0
1,960,890	-		AO356_08710	0.82	+0.6
1,960,890	-		AO356_08710	0.82	+0.9
1,960,890	-		AO356_08710	0.82	+1.6
1,960,890	-		AO356_08710	0.82	+1.4
1,960,891	+		AO356_08710	0.82	+0.9
1,960,891	+		AO356_08710	0.82	+1.5
1,960,891	+		AO356_08710	0.82	+1.2
1,960,891	+		AO356_08710	0.82	+1.1
1,960,892	-		AO356_08710	0.82	+0.8
1,960,892	-		AO356_08710	0.82	-0.4
1,960,892	-		AO356_08710	0.82	+0.3
1,960,892	-		AO356_08710	0.82	+1.2
1,961,039	+				+1.3
1,961,040	-				+1.1
1,961,045	+				+1.2
1,961,045	+				+1.1
1,961,045	+				+0.7
1,961,045	+				+0.3
1,961,045	+				+0.8
1,961,045	+				+0.6
1,961,045	+				+0.6
1,961,045	+				+1.6
1,961,045	+				+0.1
1,961,045	+				+1.6
1,961,045	+				+1.3
1,961,046	-				+0.7
1,961,046	-				-0.3
1,961,046	-				+0.2
1,961,046	-				+0.3
1,961,046	-				+1.0
1,961,046	-				+1.2
1,961,046	-				+0.3
1,961,049	+				+0.3
1,961,049	+				+0.2
1,961,049	+				+1.2
1,961,049	+				+0.8
1,961,049	+				+1.2
1,961,049	+				+0.6
1,961,050	-				+0.6
1,961,050	-				+0.1
1,961,050	-				+1.6
1,961,056	+				+1.0
1,961,056	+				+0.9
1,961,056	+				+1.1
1,961,057	-				+0.7
1,961,057	-				-0.5
1,961,057	-				-0.9
1,961,057	-				-0.4
1,961,057	-				+0.6
1,961,060	+				+1.0
1,961,060	+				+0.5
1,961,060	+				+0.9
1,961,060	+				+0.8
1,961,060	+				+1.3
1,961,060	+				+1.1
1,961,060	+				+2.2
1,961,060	+				+0.1
1,961,061	-				+0.6
1,961,061	-				-0.7
1,961,061	-				-0.2
1,961,061	-				-0.5
1,961,061	-				-0.4
1,961,064	+				+1.1
1,961,064	+				+1.4
1,961,065	-				+0.1
1,961,065	-				+0.1
1,961,065	-				-0.2
1,961,084	-				+0.2
1,961,111	+				+1.8
1,961,111	+				+0.3
1,961,111	+				+1.4
1,961,111	+				+1.4
1,961,111	+				+1.1
1,961,111	+				+0.2
1,961,112	-				-2.2
1,961,112	-				-2.0
1,961,112	-				-0.5
1,961,112	-				-0.4
1,961,115	+				+0.9
1,961,116	-				-0.5
1,961,116	-				+0.3
1,961,137	+				+0.9
1,961,137	+				+0.4
1,961,138	-				+0.2
1,961,138	-				+0.3
1,961,138	-				-0.6
1,961,138	-				-0.1
1,961,138	-				-0.4
1,961,139	+				+2.2
1,961,139	+				+0.4
1,961,139	+				+0.7
1,961,139	+				+0.8
1,961,140	-				-0.6
1,961,140	-				-0.8
1,961,140	-				-0.5
1,961,140	-				+1.1
1,961,181	+				+0.5