Strain Fitness in Shewanella loihica PV-4 around Shew_1305

Experiment: 2-Furfuraldehyde 0.0625 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.0625 vol%
1,512,203	+				+1.8
1,512,307	-		Shew_1304	0.80	-0.2
1,512,404	+				+1.0
1,512,412	-				+0.0
1,512,874	-				-0.3
1,512,934	+				-0.2
1,512,972	+		Shew_1305	0.16	+0.1
1,513,018	+		Shew_1305	0.26	+0.0
1,513,026	-		Shew_1305	0.28	+1.1
1,513,174	-		Shew_1305	0.62	+0.3
1,513,202	+		Shew_1305	0.68	+0.3
1,513,206	+		Shew_1305	0.69	+0.0
1,513,206	+		Shew_1305	0.69	+0.6
1,513,214	-		Shew_1305	0.71	+0.2
1,513,214	-		Shew_1305	0.71	+0.3
1,513,312	+				-0.3
1,513,312	+				+0.7
1,513,312	+				-1.0
1,513,320	-				+0.2
1,513,321	-				-0.8
1,513,357	-				+0.3
1,513,379	-				+0.8
1,513,417	-				+0.4
1,513,442	+				-3.9
1,513,452	+				+0.6
1,513,452	+				+0.5
1,513,452	+				-0.6
1,513,452	+				+0.3
1,513,453	+				-0.6
1,513,460	-				+0.5
1,513,461	-				+0.5
1,513,479	-				-0.6
1,513,501	+				+0.1
1,513,516	-				-0.1
1,513,599	+				+0.3
1,513,608	-				+0.2
1,513,608	-				-0.8
1,513,942	-				-0.3
1,513,947	+				+0.3
1,513,947	+				+0.3
1,513,955	-				+0.1
1,513,955	-				+0.2
1,513,955	-				-3.6
1,513,957	+				-0.3
1,513,965	-				-0.5
1,513,965	-				+0.3
1,513,965	-				+0.5
1,513,987	+				+0.5
1,513,995	+		Shew_1306	0.10	+0.1
1,513,995	-		Shew_1306	0.10	+0.6
1,513,999	-		Shew_1306	0.11	+0.1
1,514,007	+		Shew_1306	0.12	-0.0
1,514,020	+		Shew_1306	0.13	+0.3
1,514,021	+		Shew_1306	0.14	-2.5
1,514,021	+		Shew_1306	0.14	+1.1
1,514,021	+		Shew_1306	0.14	+0.6
1,514,021	+		Shew_1306	0.14	+0.2
1,514,028	-		Shew_1306	0.14	+0.7
1,514,028	-		Shew_1306	0.14	+0.2
1,514,051	+		Shew_1306	0.17	-0.5
1,514,077	-		Shew_1306	0.20	+0.4
1,514,111	+		Shew_1306	0.24	-0.3
1,514,124	+		Shew_1306	0.26	+0.4
1,514,126	+		Shew_1306	0.26	+0.5
1,514,136	+		Shew_1306	0.27	+0.2
1,514,142	+		Shew_1306	0.28	-0.3
1,514,150	-		Shew_1306	0.29	+0.2
1,514,171	+		Shew_1306	0.32	+0.3
1,514,174	-		Shew_1306	0.32	+2.3
1,514,201	+		Shew_1306	0.35	-0.7
1,514,201	+		Shew_1306	0.35	-0.4
1,514,201	+		Shew_1306	0.35	-0.1
1,514,209	-		Shew_1306	0.36	+1.3
1,514,209	-		Shew_1306	0.36	+0.5
1,514,209	-		Shew_1306	0.36	+0.6
1,514,215	+		Shew_1306	0.37	+0.0
1,514,257	+		Shew_1306	0.42	+0.3
1,514,257	+		Shew_1306	0.42	+0.2
1,514,258	+		Shew_1306	0.42	-0.4
1,514,258	-		Shew_1306	0.42	-0.0
1,514,264	+		Shew_1306	0.43	-0.1
1,514,269	+		Shew_1306	0.44	+0.1
1,514,271	+		Shew_1306	0.44	+0.2
1,514,286	+		Shew_1306	0.46	+0.3
1,514,289	-		Shew_1306	0.46	+0.6