Strain Fitness in Shewanella loihica PV-4 around Shew_1301

Experiment: 2-Furfuraldehyde 0.0625 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.0625 vol%
1,503,404	+		Shew_1300	0.56	+0.3
1,503,711	-		Shew_1300	0.77	+0.3
1,503,758	-		Shew_1300	0.80	+0.7
1,503,895	+				+0.3
1,503,925	-				-0.4
1,504,265	+				+1.5
1,504,427	+				+4.3
1,504,546	-				+4.1
1,504,578	+				+4.3
1,504,836	-		Shew_1301	0.12	+4.6
1,504,883	+		Shew_1301	0.13	+4.3
1,504,883	+		Shew_1301	0.13	+4.2
1,505,264	+		Shew_1301	0.23	+4.2
1,505,874	-		Shew_1301	0.39	+4.3
1,505,935	-		Shew_1301	0.40	+4.5
1,506,110	+		Shew_1301	0.45	+4.6
1,506,610	+		Shew_1301	0.58	+4.2
1,506,610	+		Shew_1301	0.58	+3.7
1,506,803	+		Shew_1301	0.63	+4.1
1,506,859	-		Shew_1301	0.64	+4.3
1,506,897	+		Shew_1301	0.65	+4.1
1,506,897	+		Shew_1301	0.65	+4.0
1,506,897	+		Shew_1301	0.65	+4.1
1,506,897	+		Shew_1301	0.65	+4.4
1,507,005	-		Shew_1301	0.68	+3.6
1,507,035	-		Shew_1301	0.69	+4.5
1,507,150	-		Shew_1301	0.72	+4.1
1,507,654	-		Shew_1301	0.85	+4.3
1,508,092	-				+4.4
1,508,097	+				+4.2
1,508,148	+				+4.1
1,508,233	+				+4.2
1,508,622	-				-0.3
1,508,785	+				-0.6
1,508,785	+				-1.3