Experiment: 2-Furfuraldehyde 0.0625 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0282 and Shew_0283 are separated by 115 nucleotides Shew_0283 and Shew_0284 are separated by 329 nucleotides
Shew_0282: Shew_0282 - phospholipid/glycerol acyltransferase (RefSeq), at 299,316 to 300,200
_0282
Shew_0283: Shew_0283 - Mg chelatase, subunit ChlI (RefSeq), at 300,316 to 301,836
_0283
Shew_0284: Shew_0284 - hypothetical protein (RefSeq), at 302,166 to 303,491
_0284
Position (kb) 300
301
302 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 299.604 kb on - strand, within Shew_0282 at 299.796 kb on + strand, within Shew_0282 at 299.825 kb on - strand, within Shew_0282 at 300.258 kb on + strand at 300.289 kb on - strand at 300.323 kb on + strand at 300.416 kb on - strand at 300.527 kb on - strand, within Shew_0283 at 300.552 kb on + strand, within Shew_0283 at 300.552 kb on + strand, within Shew_0283 at 300.963 kb on - strand, within Shew_0283 at 301.014 kb on + strand, within Shew_0283 at 301.022 kb on - strand, within Shew_0283 at 301.279 kb on - strand, within Shew_0283 at 301.347 kb on - strand, within Shew_0283 at 301.484 kb on + strand, within Shew_0283 at 301.683 kb on - strand, within Shew_0283 at 301.718 kb on + strand at 301.737 kb on + strand at 302.071 kb on + strand at 302.139 kb on - strand at 302.139 kb on - strand at 302.468 kb on + strand, within Shew_0284 at 302.481 kb on - strand, within Shew_0284 at 302.481 kb on - strand, within Shew_0284 at 302.621 kb on + strand, within Shew_0284 at 302.650 kb on - strand, within Shew_0284 at 302.698 kb on + strand, within Shew_0284
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.0625 vol% remove 299,604 - Shew_0282 0.33 +0.4 299,796 + Shew_0282 0.54 -0.1 299,825 - Shew_0282 0.58 -0.4 300,258 + -0.2 300,289 - +0.9 300,323 + +0.5 300,416 - +0.2 300,527 - Shew_0283 0.14 -0.2 300,552 + Shew_0283 0.16 -0.1 300,552 + Shew_0283 0.16 -0.4 300,963 - Shew_0283 0.43 +0.3 301,014 + Shew_0283 0.46 -0.2 301,022 - Shew_0283 0.46 -0.3 301,279 - Shew_0283 0.63 -0.2 301,347 - Shew_0283 0.68 +0.2 301,484 + Shew_0283 0.77 -0.5 301,683 - Shew_0283 0.90 -0.1 301,718 + +1.1 301,737 + +0.0 302,071 + +4.6 302,139 - -2.4 302,139 - -0.3 302,468 + Shew_0284 0.23 -1.8 302,481 - Shew_0284 0.24 +0.4 302,481 - Shew_0284 0.24 -0.9 302,621 + Shew_0284 0.34 -0.5 302,650 - Shew_0284 0.37 +0.3 302,698 + Shew_0284 0.40 +0.8
Or see this region's nucleotide sequence