Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3688

Experiment: Vanillin 0.25 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 0.25 mM
3,798,475	+		Ga0059261_3687	0.46	-0.0
3,798,475	+		Ga0059261_3687	0.46	+1.0
3,798,475	+		Ga0059261_3687	0.46	-0.2
3,798,475	+		Ga0059261_3687	0.46	+0.2
3,798,475	+		Ga0059261_3687	0.46	+1.5
3,798,475	+		Ga0059261_3687	0.46	-0.2
3,798,476	-		Ga0059261_3687	0.46	-0.2
3,798,476	-		Ga0059261_3687	0.46	+1.6
3,798,476	-		Ga0059261_3687	0.46	-1.8
3,798,476	-		Ga0059261_3687	0.46	+1.0
3,798,476	-		Ga0059261_3687	0.46	+0.2
3,798,476	-		Ga0059261_3687	0.46	-1.0
3,798,476	-		Ga0059261_3687	0.46	+0.2
3,798,476	-		Ga0059261_3687	0.46	-0.5
3,798,479	+		Ga0059261_3687	0.46	+0.3
3,798,479	+		Ga0059261_3687	0.46	-0.5
3,798,479	+		Ga0059261_3687	0.46	-1.1
3,798,479	+		Ga0059261_3687	0.46	-1.2
3,798,479	+		Ga0059261_3687	0.46	+0.1
3,798,480	-		Ga0059261_3687	0.46	-0.2
3,798,480	-		Ga0059261_3687	0.46	+0.1
3,798,480	-		Ga0059261_3687	0.46	+0.4
3,798,480	-		Ga0059261_3687	0.46	+0.1
3,798,480	-		Ga0059261_3687	0.46	-0.1
3,798,480	-		Ga0059261_3687	0.46	+0.4
3,798,480	-		Ga0059261_3687	0.46	+0.3
3,798,480	-		Ga0059261_3687	0.46	-0.5
3,798,480	-		Ga0059261_3687	0.46	+0.5
3,798,490	+		Ga0059261_3687	0.47	-0.1
3,798,490	+		Ga0059261_3687	0.47	-0.1
3,798,490	+		Ga0059261_3687	0.47	+2.0
3,798,490	+		Ga0059261_3687	0.47	-0.9
3,798,490	+		Ga0059261_3687	0.47	+0.4
3,798,490	+		Ga0059261_3687	0.47	-0.3
3,798,491	-		Ga0059261_3687	0.47	-1.3
3,798,491	-		Ga0059261_3687	0.47	+0.4
3,798,491	-		Ga0059261_3687	0.47	+0.3
3,798,491	-		Ga0059261_3687	0.47	-0.5
3,798,491	-		Ga0059261_3687	0.47	-0.1
3,798,802	+		Ga0059261_3687	0.66	-0.4
3,798,973	+		Ga0059261_3687	0.76	+1.0
3,798,973	+		Ga0059261_3687	0.76	+0.2
3,798,973	+		Ga0059261_3687	0.76	+0.4
3,798,974	-		Ga0059261_3687	0.76	+0.2
3,798,974	-		Ga0059261_3687	0.76	+0.4
3,798,974	-		Ga0059261_3687	0.76	-0.6
3,798,974	-		Ga0059261_3687	0.76	+0.4
3,798,986	+		Ga0059261_3687	0.77	-0.1
3,798,986	+		Ga0059261_3687	0.77	+1.4
3,798,986	+		Ga0059261_3687	0.77	-0.5
3,798,987	-		Ga0059261_3687	0.77	-1.3
3,798,987	-		Ga0059261_3687	0.77	+0.2
3,798,987	-		Ga0059261_3687	0.77	-0.0
3,798,987	-		Ga0059261_3687	0.77	+0.3
3,799,018	+		Ga0059261_3687	0.79	-0.0
3,799,018	+				-0.6
3,799,018	+		Ga0059261_3687	0.79	-0.5
3,799,018	+		Ga0059261_3687	0.79	-0.7
3,799,019	-				+1.0
3,799,019	-		Ga0059261_3687	0.79	+0.4
3,799,019	-		Ga0059261_3687	0.79	-0.8
3,799,019	-		Ga0059261_3687	0.79	+0.2
3,799,150	+		Ga0059261_3687	0.87	+0.2
3,799,150	+		Ga0059261_3687	0.87	+0.2
3,799,213	+				+1.2
3,799,214	-				+0.1
3,799,214	-				-1.6
3,799,318	+				-0.5
3,799,318	+				-0.2
3,799,319	-				-1.2
3,799,319	-				+0.7
3,799,319	-				-0.3
3,799,399	+				+0.3
3,799,399	+				+1.1
3,799,399	+				+0.5
3,799,400	-				+0.2
3,799,752	-		Ga0059261_3688	0.15	-2.2
3,801,482	+				+0.3
3,801,500	+				-0.1
3,801,501	-				-0.3
3,801,501	-				-0.5
3,801,501	-				+0.8
3,801,501	-				-0.1
3,801,501	-				-0.2
3,801,709	-		Ga0059261_3689	0.33	+0.5
3,801,709	-		Ga0059261_3689	0.33	+0.3
3,801,709	-		Ga0059261_3689	0.33	-0.1
3,801,719	+		Ga0059261_3689	0.35	-0.3
3,801,719	+		Ga0059261_3689	0.35	-0.8
3,801,719	+		Ga0059261_3689	0.35	-0.7
3,801,719	+		Ga0059261_3689	0.35	+0.0
3,801,719	+		Ga0059261_3689	0.35	+0.1
3,801,720	-		Ga0059261_3689	0.35	-0.6
3,801,720	-		Ga0059261_3689	0.35	-0.6
3,801,720	-		Ga0059261_3689	0.35	+0.4
3,801,720	-		Ga0059261_3689	0.35	-0.2
3,801,720	-		Ga0059261_3689	0.35	+0.1
3,801,861	+		Ga0059261_3689	0.58	+0.2
3,801,861	+		Ga0059261_3689	0.58	-1.8
3,801,861	+		Ga0059261_3689	0.58	+0.8
3,801,861	+		Ga0059261_3689	0.58	+0.4
3,801,861	+		Ga0059261_3689	0.58	+0.1
3,801,861	+		Ga0059261_3689	0.58	-0.3
3,801,862	-		Ga0059261_3689	0.59	+0.6
3,801,897	+		Ga0059261_3689	0.64	-0.1
3,801,897	+		Ga0059261_3689	0.64	-0.0
3,801,897	+		Ga0059261_3689	0.64	-0.4
3,801,898	-		Ga0059261_3689	0.65	-1.8
3,801,924	+		Ga0059261_3689	0.69	-1.0
3,801,924	+		Ga0059261_3689	0.69	+0.6
3,801,924	+		Ga0059261_3689	0.69	-0.5
3,801,924	+		Ga0059261_3689	0.69	+0.0
3,801,924	+		Ga0059261_3689	0.69	-0.1
3,801,924	+		Ga0059261_3689	0.69	+0.6
3,801,924	+		Ga0059261_3689	0.69	+0.1
3,801,924	+		Ga0059261_3689	0.69	+0.2
3,801,924	+		Ga0059261_3689	0.69	+0.3
3,801,924	+		Ga0059261_3689	0.69	-0.1
3,801,924	+		Ga0059261_3689	0.69	+0.8
3,801,924	+		Ga0059261_3689	0.69	-0.4
3,801,924	+		Ga0059261_3689	0.69	+0.1
3,801,924	+		Ga0059261_3689	0.69	-0.0
3,801,924	+		Ga0059261_3689	0.69	+0.8
3,801,924	+		Ga0059261_3689	0.69	+0.1
3,801,925	-		Ga0059261_3689	0.69	-1.6
3,801,925	-		Ga0059261_3689	0.69	-0.0
3,801,925	-		Ga0059261_3689	0.69	-0.2
3,801,925	-		Ga0059261_3689	0.69	-0.3
3,801,925	-		Ga0059261_3689	0.69	+0.7
3,801,925	-		Ga0059261_3689	0.69	+0.6
3,801,925	-		Ga0059261_3689	0.69	+0.4
3,801,925	-		Ga0059261_3689	0.69	-0.6
3,801,925	-		Ga0059261_3689	0.69	-0.2
3,801,925	-		Ga0059261_3689	0.69	+0.8
3,801,925	-		Ga0059261_3689	0.69	+0.2
3,801,925	-		Ga0059261_3689	0.69	+0.0
3,801,925	-		Ga0059261_3689	0.69	+0.1
3,801,925	-		Ga0059261_3689	0.69	-0.3
3,801,925	-		Ga0059261_3689	0.69	-1.0
3,801,925	-		Ga0059261_3689	0.69	-2.3
3,801,925	-		Ga0059261_3689	0.69	-0.6
3,801,925	-		Ga0059261_3689	0.69	-0.3
3,801,925	-		Ga0059261_3689	0.69	-0.3
3,801,925	-		Ga0059261_3689	0.69	-0.2
3,801,925	-		Ga0059261_3689	0.69	-0.0
3,802,083	+				-0.1
3,802,083	+				-0.3
3,802,083	+				-0.5
3,802,084	-				+0.2
3,802,084	-				-0.0
3,802,084	-				-1.5
3,802,102	-				-0.3
3,802,128	+				+0.2
3,802,128	+				+1.0
3,802,128	+				-0.2
3,802,128	+				+0.6
3,802,130	+				+0.0
3,802,130	+				-0.5
3,802,130	+				+0.4
3,802,130	+				-0.2
3,802,130	+				-0.0
3,802,131	-				+1.3
3,802,131	-				-0.4
3,802,131	-				+0.6
3,802,200	+				-0.4
3,802,200	+				+0.6
3,802,200	+				-0.0
3,802,200	+				+0.8
3,802,200	+				-1.0
3,802,200	+				+0.3
3,802,201	-				+0.2
3,802,204	+				+0.6
3,802,205	-				-0.0
3,802,205	-				-0.0
3,802,449	+		Ga0059261_3690	0.11	+0.0
3,802,465	+		Ga0059261_3690	0.12	-0.2
3,802,465	+		Ga0059261_3690	0.12	-0.1
3,802,465	+		Ga0059261_3690	0.12	+0.0
3,802,465	+		Ga0059261_3690	0.12	-0.9
3,802,465	+		Ga0059261_3690	0.12	+0.7
3,802,466	-		Ga0059261_3690	0.12	-0.1
3,802,466	-		Ga0059261_3690	0.12	-0.4
3,802,466	-		Ga0059261_3690	0.12	+0.1