Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_13390

Experiment: Spectinomycin 0.0125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0125 mg/ml
3,038,443	-		AO356_13380	0.49	+0.7
3,038,556	-		AO356_13380	0.65	+0.1
3,038,640	+		AO356_13380	0.76	+0.3
3,038,649	+		AO356_13380	0.78	+0.8
3,038,649	+		AO356_13380	0.78	-0.3
3,038,649	+		AO356_13380	0.78	+0.4
3,038,649	+		AO356_13380	0.78	+0.0
3,038,649	+		AO356_13380	0.78	+1.2
3,038,649	+		AO356_13380	0.78	+0.5
3,038,649	+		AO356_13380	0.78	+0.2
3,038,650	-		AO356_13380	0.78	+0.4
3,038,650	-		AO356_13380	0.78	-0.9
3,038,650	-		AO356_13380	0.78	+0.8
3,038,650	-		AO356_13380	0.78	-0.3
3,038,650	-		AO356_13380	0.78	+0.9
3,038,808	+				-0.1
3,038,808	+				-1.5
3,038,808	+				+0.4
3,038,809	-				-0.3
3,038,809	-				-1.0
3,038,809	-				-0.1
3,038,809	-				+0.3
3,038,900	+				+0.1
3,038,900	+				-0.6
3,038,900	+				+0.6
3,038,900	+				+1.0
3,038,901	-				-1.2
3,038,901	-				+0.2
3,038,901	-				+0.7
3,038,901	-				+0.3
3,038,901	-				-1.2
3,038,901	-				+0.2
3,038,901	-				+0.1
3,038,901	-				+0.9
3,038,903	-				+1.1
3,038,903	-				-0.2
3,038,944	+				-0.4
3,038,944	+				-0.1
3,038,944	+				-0.7
3,038,944	+				+0.8
3,038,944	+				+1.1
3,038,944	+				-1.2
3,038,945	-				-0.6
3,038,945	-				+0.7
3,039,020	+		AO356_13385	0.20	-0.3
3,039,020	+		AO356_13385	0.20	+0.2
3,039,020	+		AO356_13385	0.20	+0.4
3,039,020	+		AO356_13385	0.20	-0.6
3,039,020	+		AO356_13385	0.20	-1.0
3,039,020	+		AO356_13385	0.20	-0.7
3,039,020	+		AO356_13385	0.20	+0.2
3,039,021	-		AO356_13385	0.20	+1.1
3,039,021	-		AO356_13385	0.20	+0.2
3,039,021	-		AO356_13385	0.20	+0.3
3,039,021	-		AO356_13385	0.20	-0.5
3,039,021	-		AO356_13385	0.20	+0.7
3,039,065	+		AO356_13385	0.34	-0.2
3,039,065	+		AO356_13385	0.34	+0.7
3,039,065	+		AO356_13385	0.34	+0.6
3,039,065	+		AO356_13385	0.34	-1.0
3,039,065	+		AO356_13385	0.34	+0.8
3,039,065	+		AO356_13385	0.34	-0.2
3,039,066	-		AO356_13385	0.34	+0.2
3,039,066	-		AO356_13385	0.34	+0.0
3,039,066	-		AO356_13385	0.34	+1.7
3,039,066	-		AO356_13385	0.34	+1.3
3,039,066	-		AO356_13385	0.34	+0.2
3,039,066	-		AO356_13385	0.34	+0.3
3,039,066	-		AO356_13385	0.34	-0.1
3,039,066	-		AO356_13385	0.34	+0.0
3,039,199	+		AO356_13385	0.75	+0.4
3,039,199	+		AO356_13385	0.75	+2.2
3,039,199	+		AO356_13385	0.75	+1.0
3,039,200	-		AO356_13385	0.75	+0.1
3,039,200	-		AO356_13385	0.75	-0.7
3,039,200	-		AO356_13385	0.75	+0.4
3,039,200	-		AO356_13385	0.75	+0.2
3,039,200	-		AO356_13385	0.75	+0.9
3,039,200	-		AO356_13385	0.75	-0.2
3,039,200	-		AO356_13385	0.75	+0.3
3,039,200	-		AO356_13385	0.75	-0.0
3,039,200	-		AO356_13385	0.75	-0.6
3,039,269	-				+0.2
3,039,569	+		AO356_13390	0.23	+0.1
3,039,569	+		AO356_13390	0.23	+0.5
3,039,569	+		AO356_13390	0.23	+0.7
3,039,569	+		AO356_13390	0.23	+0.9
3,039,570	-		AO356_13390	0.23	+0.2
3,039,570	-		AO356_13390	0.23	+0.2
3,039,677	+		AO356_13390	0.32	+1.1
3,039,677	+		AO356_13390	0.32	+1.0
3,039,678	-		AO356_13390	0.32	+0.1
3,039,678	-		AO356_13390	0.32	+0.4
3,039,678	-		AO356_13390	0.32	+0.1
3,039,687	+		AO356_13390	0.32	+0.6
3,039,687	+		AO356_13390	0.32	+0.9
3,039,687	+		AO356_13390	0.32	+0.8
3,039,688	-		AO356_13390	0.33	+0.0
3,039,731	+		AO356_13390	0.36	+0.5
3,039,731	+		AO356_13390	0.36	-0.3
3,040,017	+		AO356_13390	0.60	+0.2
3,040,017	+		AO356_13390	0.60	+0.9
3,040,322	+		AO356_13390	0.85	+0.4
3,040,322	+		AO356_13390	0.85	+1.1
3,040,322	+		AO356_13390	0.85	+1.3
3,040,322	+		AO356_13390	0.85	+0.2
3,040,323	-		AO356_13390	0.85	+1.3
3,040,323	-		AO356_13390	0.85	+0.2
3,040,323	-		AO356_13390	0.85	+0.8
3,040,323	-		AO356_13390	0.85	+1.6
3,040,323	-		AO356_13390	0.85	+1.1
3,040,323	-		AO356_13390	0.85	+0.6
3,040,373	+		AO356_13390	0.90	+0.3
3,040,374	-		AO356_13390	0.90	+0.4
3,040,387	+				-0.6
3,040,388	-				+1.6
3,040,409	+				+1.1
3,040,409	+				+0.4
3,040,409	+				-0.6
3,040,409	+				+1.2
3,040,409	+				+0.4
3,040,410	-				+0.4
3,040,410	-				-0.5
3,040,410	-				+0.7
3,040,410	-				-0.2
3,040,834	+		AO356_13395	0.57	+1.4
3,040,834	+		AO356_13395	0.57	+1.2
3,040,834	+		AO356_13395	0.57	+0.8
3,041,202	+		AO356_13400	0.26	+1.2
3,041,202	+		AO356_13400	0.26	+0.1
3,041,202	+		AO356_13400	0.26	+2.0
3,041,202	+		AO356_13400	0.26	-1.0
3,041,202	+		AO356_13400	0.26	-0.1
3,041,202	+		AO356_13400	0.26	+0.4
3,041,203	-		AO356_13400	0.27	-0.1
3,041,203	-		AO356_13400	0.27	+0.3
3,041,203	-		AO356_13400	0.27	+0.0
3,041,203	-		AO356_13400	0.27	+0.8
3,041,203	-		AO356_13400	0.27	-0.0
3,041,203	-		AO356_13400	0.27	+0.6
3,041,203	-		AO356_13400	0.27	+0.4
3,041,203	-		AO356_13400	0.27	+0.2
3,041,203	-		AO356_13400	0.27	+0.2
3,041,205	+		AO356_13400	0.27	+0.6
3,041,205	+		AO356_13400	0.27	+2.1
3,041,205	+		AO356_13400	0.27	+1.0
3,041,205	+		AO356_13400	0.27	+1.2
3,041,205	+		AO356_13400	0.27	+1.2
3,041,205	+		AO356_13400	0.27	+0.4
3,041,205	+		AO356_13400	0.27	+1.7
3,041,205	+		AO356_13400	0.27	+1.0
3,041,205	+		AO356_13400	0.27	+0.9
3,041,205	+		AO356_13400	0.27	+0.9
3,041,206	-		AO356_13400	0.27	-0.3
3,041,206	-		AO356_13400	0.27	-1.0
3,041,206	-		AO356_13400	0.27	-0.2
3,041,206	-		AO356_13400	0.27	-0.8
3,041,206	-		AO356_13400	0.27	-0.2
3,041,206	-		AO356_13400	0.27	-0.3
3,041,409	+		AO356_13400	0.74	+0.2
3,041,409	+		AO356_13400	0.74	-0.8
3,041,409	+		AO356_13400	0.74	+0.9
3,041,409	+		AO356_13400	0.74	-0.1
3,041,409	+		AO356_13400	0.74	+0.3
3,041,409	+		AO356_13400	0.74	+0.1
3,041,409	+		AO356_13400	0.74	-1.7
3,041,409	+		AO356_13400	0.74	+0.2
3,041,409	+		AO356_13400	0.74	+0.4
3,041,410	-		AO356_13400	0.74	+0.7
3,041,410	-		AO356_13400	0.74	+0.2
3,041,410	-		AO356_13400	0.74	-0.6
3,041,422	+		AO356_13400	0.77	+0.0
3,041,423	-		AO356_13400	0.77	-0.4