Strain Fitness in Shewanella loihica PV-4 around Shew_3802

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
4,524,079	-		Shew_3801	0.62	-0.1
4,524,079	-		Shew_3801	0.62	+0.0
4,524,093	-		Shew_3801	0.63	-0.5
4,524,107	+		Shew_3801	0.64	+0.1
4,524,111	-		Shew_3801	0.64	-1.6
4,524,111	-		Shew_3801	0.64	+0.3
4,524,111	-		Shew_3801	0.64	-0.0
4,524,115	-		Shew_3801	0.64	-0.2
4,524,115	-		Shew_3801	0.64	+0.5
4,524,115	-		Shew_3801	0.64	-0.3
4,524,117	-		Shew_3801	0.64	-0.3
4,524,151	-		Shew_3801	0.65	+0.6
4,524,151	-		Shew_3801	0.65	-0.6
4,524,152	+		Shew_3801	0.66	-0.3
4,524,160	-		Shew_3801	0.66	+0.0
4,524,176	-		Shew_3801	0.67	-0.1
4,524,176	-		Shew_3801	0.67	+0.1
4,524,257	+		Shew_3801	0.70	+0.6
4,524,265	-		Shew_3801	0.71	-0.3
4,524,265	-		Shew_3801	0.71	+0.4
4,524,265	-		Shew_3801	0.71	+0.0
4,524,277	+		Shew_3801	0.71	-0.3
4,524,277	+		Shew_3801	0.71	+0.1
4,524,284	+		Shew_3801	0.71	+0.4
4,524,285	-		Shew_3801	0.71	-0.2
4,524,292	-		Shew_3801	0.72	-0.2
4,524,310	-		Shew_3801	0.73	-0.3
4,524,323	+		Shew_3801	0.73	+0.1
4,524,349	+		Shew_3801	0.74	+0.1
4,524,376	+		Shew_3801	0.75	+1.7
4,524,384	-		Shew_3801	0.76	-0.1
4,524,384	-		Shew_3801	0.76	+0.0
4,524,444	+		Shew_3801	0.79	+0.2
4,524,563	+		Shew_3801	0.84	+0.7
4,524,563	+		Shew_3801	0.84	+0.3
4,524,567	+		Shew_3801	0.84	+0.9
4,524,571	-		Shew_3801	0.84	-1.7
4,524,571	-		Shew_3801	0.84	-1.6
4,524,640	+		Shew_3801	0.87	+0.6
4,524,691	-		Shew_3801	0.90	+0.0
4,524,701	-				+0.6
4,524,701	-				-0.3
4,524,770	+				+0.1
4,524,867	+				+1.4
4,524,867	+				-0.2
4,524,907	+				-0.1
4,525,067	+				-0.4
4,525,067	+				-0.0
4,525,072	+				-0.8
4,525,158	+				-0.8
4,525,281	-		Shew_3802	0.17	+0.0
4,525,570	+		Shew_3802	0.42	+0.2
4,525,679	-		Shew_3802	0.51	-1.0
4,525,807	+		Shew_3802	0.62	-1.2
4,525,807	+		Shew_3802	0.62	-0.1
4,525,814	+		Shew_3802	0.62	-2.4
4,526,209	+				-0.3
4,526,217	-				-0.3
4,526,372	-				-0.0
4,526,422	+				-1.1
4,526,435	+				-0.0