Strain Fitness in Shewanella loihica PV-4 around Shew_3613

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
4,309,820	-				+0.1
4,309,891	-		Shew_3612	0.10	-3.8
4,310,156	+		Shew_3612	0.37	-2.2
4,310,469	+		Shew_3612	0.68	-3.3
4,310,505	-		Shew_3612	0.72	-3.0
4,310,577	+		Shew_3612	0.79	-1.8
4,310,620	-		Shew_3612	0.83	-2.7
4,310,958	-		Shew_3613	0.23	-0.5
4,310,978	+		Shew_3613	0.26	-1.7
4,310,986	-		Shew_3613	0.27	-0.4
4,311,022	+		Shew_3613	0.31	-1.2
4,311,027	+		Shew_3613	0.32	-2.2
4,311,035	-		Shew_3613	0.33	-2.1
4,311,073	+		Shew_3613	0.38	-0.9
4,311,110	+		Shew_3613	0.42	-3.0
4,311,110	+		Shew_3613	0.42	+0.4
4,311,449	+		Shew_3613	0.86	-4.2
4,311,527	-				-1.4
4,311,574	-				+0.8
4,311,824	-		Shew_3614	0.70	-2.9
4,311,930	-				-0.4
4,311,973	-				+1.1
4,311,975	+				+0.3
4,311,975	+				-3.6
4,311,983	-				+0.1
4,311,983	-				-1.6
4,312,409	-		Shew_3615	0.82	+1.1
4,312,526	+				+0.5
4,312,534	-				+0.4