Strain Fitness in Shewanella loihica PV-4 around Shew_3503

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
4,189,464	+		Shew_3502	0.71	-0.1
4,189,676	+		Shew_3502	0.84	-0.5
4,189,676	+		Shew_3502	0.84	-0.4
4,189,684	-		Shew_3502	0.84	-0.5
4,189,893	+				-1.2
4,189,893	+				+0.1
4,190,101	+				-0.4
4,190,163	-				-0.4
4,190,211	-				-0.6
4,190,466	-		Shew_3503	0.37	-2.7
4,190,515	-		Shew_3503	0.43	+0.0
4,190,515	-		Shew_3503	0.43	-0.7
4,190,824	+		Shew_3503	0.76	-0.3
4,190,824	+		Shew_3503	0.76	-0.7
4,190,832	-		Shew_3503	0.77	-1.0
4,190,832	-		Shew_3503	0.77	-1.0
4,190,880	+		Shew_3503	0.82	-0.9
4,190,948	+		Shew_3503	0.89	-2.0
4,191,198	+				-0.4
4,191,396	+		Shew_3504	0.22	+0.4
4,191,404	-		Shew_3504	0.23	-0.3
4,191,471	-		Shew_3504	0.33	-0.1
4,191,471	-		Shew_3504	0.33	-0.7
4,191,783	+		Shew_3504	0.80	-2.1
4,191,791	-		Shew_3504	0.81	+0.9
4,191,791	-		Shew_3504	0.81	-0.3
4,191,939	+				-0.2
4,191,959	+				-0.0
4,191,959	+				-0.0
4,192,031	+				+0.1