Strain Fitness in Shewanella loihica PV-4 around Shew_3427

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
4,084,499	+		Shew_3426	0.61	-0.8
4,084,666	+		Shew_3426	0.69	+0.1
4,084,677	-		Shew_3426	0.70	-0.2
4,084,735	+		Shew_3426	0.73	-0.1
4,084,921	-		Shew_3426	0.82	+0.5
4,085,194	-				+0.9
4,085,210	+				+0.2
4,085,343	+				+0.1
4,085,597	+				-3.2
4,085,597	+				-5.9
4,085,930	-		Shew_3427	0.23	-2.2
4,086,034	-		Shew_3427	0.27	-1.5
4,086,248	+		Shew_3427	0.37	-3.2
4,086,256	-		Shew_3427	0.37	-3.8
4,086,256	-		Shew_3427	0.37	-4.0
4,086,518	-		Shew_3427	0.49	-4.1
4,086,593	+		Shew_3427	0.53	-3.0
4,086,601	-		Shew_3427	0.53	-2.1
4,086,601	-		Shew_3427	0.53	-1.9
4,086,637	+		Shew_3427	0.55	-2.8
4,086,798	+		Shew_3427	0.62	-3.0
4,086,982	+		Shew_3427	0.70	-3.8
4,087,101	-		Shew_3427	0.75	-2.1
4,087,515	-				-1.2
4,087,556	+				-5.3
4,087,557	+				-3.0
4,087,782	-				+0.4
4,087,911	-				-1.6
4,088,363	+		Shew_3428	0.14	-0.5
4,088,363	+		Shew_3428	0.14	+0.5
4,088,371	-		Shew_3428	0.14	+0.2
4,088,371	-		Shew_3428	0.14	-0.3
4,088,415	+		Shew_3428	0.15	+0.4