Strain Fitness in Shewanella loihica PV-4 around Shew_3407

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
4,056,728	+		Shew_3406	0.31	-0.2
4,056,728	+		Shew_3406	0.31	+0.1
4,056,868	+		Shew_3406	0.44	-0.3
4,056,879	+		Shew_3406	0.45	+0.5
4,056,879	+		Shew_3406	0.45	-1.3
4,056,887	-		Shew_3406	0.46	-0.4
4,056,887	-		Shew_3406	0.46	-1.6
4,056,929	-		Shew_3406	0.50	+0.2
4,057,109	+		Shew_3406	0.67	-0.4
4,057,318	+		Shew_3406	0.86	-0.2
4,057,318	-		Shew_3406	0.86	+0.2
4,057,419	+				-0.9
4,057,419	+				-1.0
4,057,736	+		Shew_3407	0.17	+2.8
4,057,818	+		Shew_3407	0.26	+0.3
4,057,851	+		Shew_3407	0.29	-0.3
4,057,851	+		Shew_3407	0.29	+0.1
4,057,921	-		Shew_3407	0.37	-0.1
4,057,936	+		Shew_3407	0.38	+1.6
4,057,943	+		Shew_3407	0.39	+0.8
4,057,959	+		Shew_3407	0.41	+1.2
4,058,004	+		Shew_3407	0.46	+0.4
4,058,054	-		Shew_3407	0.51	-0.7
4,058,075	+		Shew_3407	0.53	+0.3
4,058,250	-		Shew_3407	0.72	+0.4
4,058,250	-		Shew_3407	0.72	+0.2
4,058,287	+		Shew_3407	0.76	+0.3
4,058,450	-				+0.6
4,058,627	+				+0.7
4,058,885	-		Shew_3408	0.37	+1.2
4,058,977	+		Shew_3408	0.49	+0.5
4,058,990	-		Shew_3408	0.51	+0.7
4,059,156	+		Shew_3408	0.74	+1.9
4,059,228	+		Shew_3408	0.84	+0.5
4,059,324	-				+0.5