Strain Fitness in Shewanella loihica PV-4 around Shew_3345

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
3,988,894	+		Shew_3344	0.19	+0.3
3,988,933	+		Shew_3344	0.23	-0.6
3,988,999	+		Shew_3344	0.30	-0.2
3,989,273	-		Shew_3344	0.60	-0.0
3,989,456	-		Shew_3344	0.80	-2.1
3,989,456	-		Shew_3344	0.80	+0.3
3,989,536	-		Shew_3344	0.88	+0.2
3,989,561	-				-0.3
3,990,096	-		Shew_3345	0.49	-0.7
3,990,274	-		Shew_3345	0.68	-1.0
3,990,295	-		Shew_3345	0.71	-0.2
3,990,686	-				-0.1
3,990,710	-				+0.1
3,990,782	-				-0.0
3,990,937	-		Shew_3346	0.25	-0.2
3,990,976	-		Shew_3346	0.31	-3.3
3,991,092	+		Shew_3346	0.48	-1.3
3,991,100	-		Shew_3346	0.49	-0.4
3,991,326	-		Shew_3346	0.82	+0.1
3,991,561	-				+1.0
3,991,563	+				+1.0