Strain Fitness in Shewanella loihica PV-4 around Shew_3225

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
3,847,254	+				-0.3
3,847,275	-				-1.8
3,847,352	+				+0.1
3,847,733	+		Shew_3224	0.56	+0.2
3,847,836	+		Shew_3224	0.70	-0.1
3,847,836	+		Shew_3224	0.70	-0.3
3,847,844	-		Shew_3224	0.71	-2.7
3,847,844	-		Shew_3224	0.71	-3.4
3,847,844	-		Shew_3224	0.71	-2.6
3,847,934	+		Shew_3224	0.84	+0.4
3,847,997	-				-3.2
3,848,197	+		Shew_3225	0.11	-3.7
3,848,753	-		Shew_3225	0.70	-3.1
3,848,866	+		Shew_3225	0.82	-3.1
3,848,956	+				-2.2
3,848,956	+				-3.9
3,849,099	+				-2.1
3,849,306	-		Shew_3226	0.16	+0.3
3,849,454	-		Shew_3226	0.25	+0.2
3,849,551	-		Shew_3226	0.31	-0.4
3,849,623	+		Shew_3226	0.35	-0.2
3,849,681	-		Shew_3226	0.39	-0.1
3,849,760	-		Shew_3226	0.43	-0.7