Strain Fitness in Shewanella loihica PV-4 around Shew_3173

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
3,776,007	+		Shew_3172	0.29	+0.8
3,776,087	-		Shew_3172	0.35	-0.4
3,776,132	+		Shew_3172	0.39	-0.1
3,776,226	-		Shew_3172	0.46	+0.1
3,776,248	-		Shew_3172	0.48	+0.3
3,776,338	-		Shew_3172	0.55	-0.0
3,776,363	+		Shew_3172	0.57	-2.2
3,776,689	-		Shew_3172	0.82	-0.0
3,776,694	-		Shew_3172	0.83	-0.1
3,776,753	-		Shew_3172	0.87	-1.3
3,776,753	-		Shew_3172	0.87	-1.4
3,776,809	+				+0.2
3,776,952	+				-1.3
3,777,179	-		Shew_3173	0.17	+0.5
3,777,422	+		Shew_3173	0.34	+0.3
3,777,504	+		Shew_3173	0.39	+0.1
3,777,773	+		Shew_3173	0.58	-0.5
3,777,773	+		Shew_3173	0.58	+0.6
3,777,774	-		Shew_3173	0.58	-0.6
3,777,886	-		Shew_3173	0.65	-0.1
3,777,939	-		Shew_3173	0.69	+0.4
3,777,959	-		Shew_3173	0.70	-0.0
3,778,020	+		Shew_3173	0.75	-1.1
3,778,020	+		Shew_3173	0.75	-0.6
3,778,028	-		Shew_3173	0.75	+0.4
3,778,092	+		Shew_3173	0.79	-0.3
3,778,100	-		Shew_3173	0.80	-0.8
3,778,100	-		Shew_3173	0.80	-0.1
3,778,100	-		Shew_3173	0.80	+0.0
3,778,110	-		Shew_3173	0.81	+0.1
3,778,110	-		Shew_3173	0.81	-0.1
3,778,202	-		Shew_3173	0.87	+0.0
3,778,259	+				-0.9
3,778,375	+				-0.1
3,778,691	-		Shew_3174	0.16	+0.4
3,778,869	+		Shew_3174	0.34	-0.6
3,778,869	-		Shew_3174	0.34	-0.1
3,779,036	-		Shew_3174	0.52	+0.9
3,779,170	+		Shew_3174	0.66	-0.4