Strain Fitness in Shewanella loihica PV-4 around Shew_3130

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
3,720,952	+		Shew_3128	0.54	-1.2
3,720,960	-		Shew_3128	0.55	+0.9
3,720,976	+		Shew_3128	0.57	+0.0
3,721,077	+		Shew_3128	0.72	-0.9
3,721,218	+				-0.7
3,722,022	+				+0.0
3,722,030	-		Shew_3130	0.10	-1.0
3,722,156	+		Shew_3130	0.24	-0.7
3,722,380	+		Shew_3130	0.47	-0.5
3,722,386	-		Shew_3130	0.47	-2.0
3,722,737	+		Shew_3130	0.84	-0.6
3,722,822	-				+0.4
3,722,901	+				+2.4
3,722,991	+				-3.4
3,723,576	+		Shew_3131	0.42	-2.1